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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1771 A_BomoASG_c1246_g1_i1
264bp
FPKM:2.12 TPM:1.62
1772 A_BomoASG_c12470_g1_i1
532bp
FPKM:5.77 TPM:4.43
1773 A_BomoASG_c12471_g1_i1
298bp
FPKM:7.74 TPM:5.94
1774 A_BomoASG_c12472_g1_i1
885bp
 LOW_QUALITY_PROTEIN:_fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
FPKM:3.79 TPM:2.91
1775 A_BomoASG_c12473_g1_i1
334bp
FPKM:16.99 TPM:13.04
1776 A_BomoASG_c12475_g1_i1
206bp
 PREDICTED:_sodium/potassium-transporting_ATPase_subunit_alpha_isoform_X8_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0001894 P tissue homeostasis
GO:0005391 F P-type sodium:potassium-exchanging transporter activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005890 C sodium:potassium-exchanging ATPase complex
GO:0005918 C septate junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006883 P cellular sodium ion homeostasis
GO:0007268 P chemical synaptic transmission
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007630 P jump response
GO:0008152 P metabolic process
GO:0008324 F cation transmembrane transporter activity
GO:0008340 P determination of adult lifespan
GO:0008344 P adult locomotory behavior
GO:0008360 P regulation of cell shape
GO:0009266 P response to temperature stimulus
GO:0009612 P response to mechanical stimulus
GO:0010107 P potassium ion import across plasma membrane
GO:0010248 P establishment or maintenance of transmembrane electrochemical gradient
GO:0015991 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019991 P septate junction assembly
GO:0030007 P cellular potassium ion homeostasis
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0036376 P sodium ion export across plasma membrane
GO:0046872 F metal ion binding
GO:0050905 P neuromuscular process
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0060439 P trachea morphogenesis
FPKM:1.03 TPM:0.79
1777 A_BomoASG_c12476_g1_i1
226bp
FPKM:2.35 TPM:1.80
1778 A_BomoASG_c12476_g2_i1
215bp
FPKM:1.81 TPM:1.39
1779 A_BomoASG_c12477_g1_i1
325bp
 uncharacterized_protein_LOC110382638_[Helicoverpa_armigera]
FPKM:1.72 TPM:1.32
1780 A_BomoASG_c12478_g1_i1
2252bp
 COP9_signalosome_complex_subunit_2_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:28.01 TPM:21.48
1781 A_BomoASG_c12478_g1_i2
2274bp
 COP9_signalosome_complex_subunit_2_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:4.12 TPM:3.16
1782 A_BomoASG_c12480_g1_i1
253bp
FPKM:4.68 TPM:3.59
1783 A_BomoASG_c12481_g1_i1
865bp
 phosphomevalonate_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004631 F phosphomevalonate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016126 P sterol biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019287 P isopentenyl diphosphate biosynthetic process, mevalonate pathway
FPKM:24.90 TPM:19.10
1784 A_BomoASG_c12482_g1_i1
338bp
FPKM:2.24 TPM:1.72
1785 A_BomoASG_c12483_g1_i1
366bp
 fungal_protease_inhibitor_F-like_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:9.44 TPM:7.24
1786 A_BomoASG_c12484_g1_i1
277bp
FPKM:7.60 TPM:5.83
1787 A_BomoASG_c12485_g1_i1
466bp
 PREDICTED:_uncharacterized_protein_LOC105844739_[Hydra_vulgaris]
FPKM:3.21 TPM:2.46
1788 A_BomoASG_c12486_g1_i1
335bp
FPKM:9.43 TPM:7.23
1789 A_BomoASG_c12487_g1_i1
309bp
FPKM:3.03 TPM:2.33
1790 A_BomoASG_c12488_g1_i1
221bp
 rho_GTPase-activating_protein_21_[Bombyx_mori]
FPKM:7.51 TPM:5.76
1791 A_BomoASG_c12489_g1_i1
462bp
 uncharacterized_protein_LOC101746861_[Bombyx_mori]
FPKM:1.91 TPM:1.47
1792 A_BomoASG_c12489_g2_i1
202bp
FPKM:3.30 TPM:2.53
1793 A_BomoASG_c12492_g1_i1
692bp
 ER_degradation-enhancing_alpha-mannosidase-like_protein_2_isoform_X2_[Bombyx_mori]
FPKM:6.27 TPM:4.81
1794 A_BomoASG_c12492_g1_i2
2299bp
 ER_degradation-enhancing_alpha-mannosidase-like_protein_2_isoform_X1_[Bombyx_mori]
GO:0001948 F protein binding
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006491 P N-glycan processing
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1904154 P positive regulation of retrograde protein transport, ER to cytosol
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
FPKM:25.13 TPM:19.28
1795 A_BomoASG_c12493_g1_i1
2546bp
 uncharacterized_protein_LOC101740597_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0042302 F structural constituent of cuticle
GO:0060102 C collagen and cuticulin-based cuticle extracellular matrix
FPKM:18.76 TPM:14.39
1796 A_BomoASG_c12495_g1_i1
389bp
FPKM:4.51 TPM:3.46
1797 A_BomoASG_c12497_g1_i1
442bp
 protein_GUCD1_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:5.94 TPM:4.55
1798 A_BomoASG_c12498_g1_i1
460bp
FPKM:28.91 TPM:22.17
1799 A_BomoASG_c12499_g1_i1
222bp
 basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X1_[Bombyx_mori]
GO:0001822 P kidney development
GO:0001932 P regulation of protein phosphorylation
GO:0001942 P hair follicle development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0009954 P proximal/distal pattern formation
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016600 C flotillin complex
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030279 P negative regulation of ossification
GO:0030326 P embryonic limb morphogenesis
GO:0030425 C dendrite
GO:0030509 P BMP signaling pathway
GO:0030971 F receptor tyrosine kinase binding
GO:0031594 C neuromuscular junction
GO:0034185 F apolipoprotein binding
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042733 P embryonic digit morphogenesis
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043113 P receptor clustering
GO:0048513 P animal organ development
GO:0048813 P dendrite morphogenesis
GO:0048856 P anatomical structure development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050771 P negative regulation of axonogenesis
GO:0050808 P synapse organization
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051290 P protein heterotetramerization
GO:0060173 P limb development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097060 C synaptic membrane
GO:0097104 P postsynaptic membrane assembly
GO:0097105 P presynaptic membrane assembly
GO:0097110 F scaffold protein binding
GO:1901631 P positive regulation of presynaptic membrane organization
GO:1904395 P positive regulation of skeletal muscle acetylcholine-gated channel clustering
FPKM:0.00 TPM:0.00
1800 A_BomoASG_c12499_g1_i2
322bp
 basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X1_[Bombyx_mori]
GO:0001822 P kidney development
GO:0001932 P regulation of protein phosphorylation
GO:0001942 P hair follicle development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0009954 P proximal/distal pattern formation
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016600 C flotillin complex
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030279 P negative regulation of ossification
GO:0030326 P embryonic limb morphogenesis
GO:0030425 C dendrite
GO:0030509 P BMP signaling pathway
GO:0030971 F receptor tyrosine kinase binding
GO:0031594 C neuromuscular junction
GO:0034185 F apolipoprotein binding
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042733 P embryonic digit morphogenesis
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043113 P receptor clustering
GO:0048513 P animal organ development
GO:0048813 P dendrite morphogenesis
GO:0048856 P anatomical structure development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050771 P negative regulation of axonogenesis
GO:0050808 P synapse organization
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051290 P protein heterotetramerization
GO:0060173 P limb development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097060 C synaptic membrane
GO:0097104 P postsynaptic membrane assembly
GO:0097105 P presynaptic membrane assembly
GO:0097110 F scaffold protein binding
GO:1901631 P positive regulation of presynaptic membrane organization
GO:1904395 P positive regulation of skeletal muscle acetylcholine-gated channel clustering
FPKM:2.10 TPM:1.61
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