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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12492_g1_i2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		ER_degradation-enhancing_alpha-mannosidase-like_protein_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0001948 F protein binding
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006491 P N-glycan processing
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1904154 P positive regulation of retrograde protein transport, ER to cytosol
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:25.13 TPM:19.28
ORF EntryO_BomoASG2061_complete:A_BomoASG_c12492_g1_i2
Sequence
(Nucleotide)
AATGATCAGCTGGAAACTATGGGAAAGTTTATGCAAATGTAAATAAATATAAAAGACAAA
AAACTAATAAAAATGGTCAAATTAACCTTCCTGATCAGTATTTCAGTGTTGACTTGTAAT
TTAATTTTAAGTGTACGAGTATACAAACGTGCAGATATACTTAAACTAAGAGAGGAAGTA
CGTGAAATGTTTCAACATGCATACGACAGCTATTTAAGATATGCATATCCTTATGACGAA
TTACGTCCATTGAGCTGCGACGGTGTTGATACCTGGGGCAGTTACTCACTCACCCTCATT
GATGCATTGGACACGCTTGCCATTATGGGAAACTATAGTGAATTTAATCGAGTAGTAGAT
ATAGTACTACAGAAAAGACACTTTGATGCAGACATTAACGTTTCAGTGTTTGAGACGAAT
ATTAGAATTGTTGGCGGTTTATTGAGTGCTCATTTACTGTCACATAAAACTGGGATGAAA
TTAGAACCAGGCTGGCCATGCAATGGTCCTTTACTTCGTTTAGCTGAAGATGTAGCACAG
AGACTAATAGCTGCATTTGATACAACTACTGGAATGCCTTATGGAACAATTAACTTGCGA
TCAGGTGTTCCACCTGGGGAAACTAGTATCACATGCACTGCTGGAGTTGGTACATTTATA
ATTGAGTTTGGTACTTTGAGTAGACTGACAGGAGATCCATTGTATGAAGAGGTAGCTTAT
AATGCTTTGAAAGCCTTATACCATCATAGATCACCAATTGGTCTCCTTGGCAACCACATA
GATGTGATGACTGGACGCTGGACAGCTCAAGATGCTGGAATTGGTGGTGGAATCGATTCT
TATTATGAATATTTGGTTAAAGGTGCCATACTACTAGAGAAGCCAGAGTTAATGTCCATG
TTCTTAGAAGCACGTCAATCTATTGAGAAGTACCTGAAAAAAGATGATTGGTTTGTGTGG
GCCACTATGTTGCGTGGGCACGTCACCTTACCTGTCTTTCAGTCTCTTGAATCATATTGG
CCAGGTCTTTTAAGCCTCATAGGCGAAAGTGACGCAGCGATGCGCATAATTCACAACTAC
CACAGCGTGTGGCGCCAATATGGATTTACACCTGAAGTGTACAATCTCGGGACGGGTGAG
GCGTCTTCGTCACGCGAGAGTTATCCCCTACGACCCGAACTCATAGAGTCAATCATGTAT
TTGTACCGAGACACCAGAGACCCTATACTGTTGCAAATGGGCGAAGATATTCTGAGGAGC
ATACAGCATAGTGCCAGGACACCGTGTGGGTATGCAACGATAAAAGATGTTCGTGACCAT
CGTAAAGAAGATCGCATGGAATCGTTTTTCTTAGCCGAAACCACAAAATACCTGTACCTA
CTGTTCGATCCGGATAATTTCATTCACAACCCTGGGGTCCGCGGTACTGTCATCGACACA
CCTAATGGCGAATGCGTGGTCGACCTTGGCGGATACATCTTCAATACAGAAGCACATCCG
ATTGACCCTAACATGCTGTATTGCTGCCATGAAGCTAGACAAGGTATAAATATCAGCGAG
GTTTACAGTATATACCAAATTTTGGAAGAAGAAGATAATATAAAATTTATGACTATGATA
GAAGCGAACACCAATGAAACTAAGATCACTCAATCGAACAACAACAATAATGAGAGTGCA
ATAGAAAATAAAACAATTGACCACACAGAACCGAAGGAAAGATCAGATGAAAACGAGCCT
GAACAAAATCAAGTATTGATAAAAACTGAATCGAGAACCGGATACGTCAACCTCGACGGA
ACGGAAAGGGAGAACGCAAACGAATCAAACCTCAGTGATCTTGTTAAAGAGACGATCAAT
AAATATTACAACGACACTATAAATGCCGAAACACAAGAAAATGTTAAACATTCAGCCGAA
GAACCAACGGCAGGATCGTCGCAAACCGTTGAAGTGGACGACATAATCGTGCCAGAGAAA
TCGGAGGTGCAACTGCCAAGCGTCACGAAAACGAAAGAAGTAATGAACATGCTGCCAAAA
GTTATACAAGACTTTTTGAACAGCGATTGGAAATCGAAACCGAAATGCGAACCGCAGAAG
ATGTTAGAAAGGATACGTAGAGAACAGAAGTATCCAGATCACCCGGATGTATATAAGTAC
GAGTTATTATTGACGCCGGCTCCGTCGTTTCTACAAAGAATATCGTTGGCCGGAGAGTTC
TTAAATAAGAAGCAACTGGAGTTGTGATATTTTGTTCGACTGATTAAGTTTATAGGGGGA
CAGATCGGAAGAGCGTCGT
(2299 bp)

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