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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1801 A_BomoASG_c1249_g1_i1
378bp
 tRNA-splicing_endonuclease_subunit_Sen2_[Bombyx_mori]
FPKM:2.10 TPM:1.61
1802 A_BomoASG_c124_g1_i1
953bp
FPKM:40.04 TPM:30.71
1803 A_BomoASG_c12500_g1_i1
380bp
FPKM:3.13 TPM:2.40
1804 A_BomoASG_c12501_g1_i1
1490bp
 glutamate-rich_WD_repeat-containing_protein_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:24.73 TPM:18.97
1805 A_BomoASG_c12501_g1_i2
685bp
 glutamate-rich_WD_repeat-containing_protein_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0044822 F RNA binding
FPKM:14.27 TPM:10.95
1806 A_BomoASG_c12502_g1_i1
476bp
FPKM:1.28 TPM:0.98
1807 A_BomoASG_c12505_g1_i1
227bp
FPKM:1.55 TPM:1.19
1808 A_BomoASG_c12505_g2_i1
357bp
FPKM:1700.55 TPM:1304.39
1809 A_BomoASG_c12506_g1_i1
204bp
FPKM:5.32 TPM:4.08
1810 A_BomoASG_c12507_g1_i1
307bp
FPKM:2.69 TPM:2.06
1811 A_BomoASG_c12508_g1_i1
333bp
FPKM:2.96 TPM:2.27
1812 A_BomoASG_c12509_g1_i1
731bp
FPKM:6.24 TPM:4.79
1813 A_BomoASG_c12510_g1_i1
248bp
FPKM:2.46 TPM:1.88
1814 A_BomoASG_c12512_g1_i1
285bp
FPKM:1.34 TPM:1.03
1815 A_BomoASG_c12512_g2_i1
256bp
FPKM:6.26 TPM:4.80
1816 A_BomoASG_c12513_g1_i1
309bp
 PREDICTED:_uncharacterized_protein_LOC105556882_[Vollenhovia_emeryi]
FPKM:1.14 TPM:0.87
1817 A_BomoASG_c12514_g1_i1
1320bp
 glycosyltransferase_precursor_[Bombyx_mori]
GO:0001744 P insect visual primordium formation
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0007411 P axon guidance
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019187 F beta-1,4-mannosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033227 P dsRNA transport
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0045165 P cell fate commitment
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0046662 P regulation of oviposition
GO:0048477 P oogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0097502 P mannosylation
FPKM:16.10 TPM:12.35
1818 A_BomoASG_c12515_g1_i1
499bp
FPKM:3.42 TPM:2.62
1819 A_BomoASG_c12515_g2_i1
225bp
FPKM:0.79 TPM:0.61
1820 A_BomoASG_c12516_g1_i1
1052bp
FPKM:30.57 TPM:23.45
1821 A_BomoASG_c12517_g1_i1
584bp
FPKM:2.33 TPM:1.79
1822 A_BomoASG_c12519_g1_i1
318bp
 polypeptide_N-acetylgalactosaminyltransferase_3_[Bombyx_mori]
FPKM:3.94 TPM:3.02
1823 A_BomoASG_c1251_g1_i1
253bp
FPKM:1.75 TPM:1.35
1824 A_BomoASG_c12520_g1_i1
319bp
 hypothetical_protein_RR48_05192_[Papilio_machaon]
FPKM:4.27 TPM:3.28
1825 A_BomoASG_c12522_g1_i1
747bp
 potassium_channel_subfamily_K_member_9_[Bombyx_mori]
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0071805 P potassium ion transmembrane transport
FPKM:1.39 TPM:1.07
1826 A_BomoASG_c12522_g2_i1
274bp
FPKM:0.00 TPM:0.00
1827 A_BomoASG_c12526_g1_i1
265bp
FPKM:2.62 TPM:2.01
1828 A_BomoASG_c12527_g1_i1
1798bp
 IST1_homolog_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0002230 P positive regulation of defense response to virus by host
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0009838 P abscission
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0019076 P viral release from host cell
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032403 F protein-containing complex binding
GO:0036258 P multivesicular body assembly
GO:0045184 P establishment of protein localization
GO:0045862 P positive regulation of proteolysis
GO:0046745 P viral capsid secondary envelopment
GO:0048672 P positive regulation of collateral sprouting
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0090541 F MIT domain binding
GO:0090543 C Flemming body
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
GO:1904903 P ESCRT III complex disassembly
FPKM:49.28 TPM:37.80
1829 A_BomoASG_c12528_g1_i1
299bp
 phospholipase_C_beta_1_[Bombyx_mori]
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005623 C obsolete cell
GO:0006629 P lipid metabolic process
GO:0006651 P diacylglycerol biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007165 P signal transduction
GO:0007629 P flight behavior
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0035556 P intracellular signal transduction
GO:0070050 P neuron cellular homeostasis
GO:1900073 P regulation of neuromuscular synaptic transmission
FPKM:3.64 TPM:2.79
1830 A_BomoASG_c12529_g1_i1
336bp
FPKM:3.56 TPM:2.73
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