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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1741 A_BomoASG_c12437_g1_i1
245bp
FPKM:2.53 TPM:1.94
1742 A_BomoASG_c12438_g1_i1
246bp
FPKM:10.03 TPM:7.69
1743 A_BomoASG_c12439_g1_i1
415bp
FPKM:27.77 TPM:21.30
1744 A_BomoASG_c1243_g1_i1
453bp
FPKM:4.34 TPM:3.33
1745 A_BomoASG_c12441_g1_i1
465bp
 PREDICTED:_nuclear_receptor_coactivator_5_isoform_X1_[Monodelphis_domestica]
FPKM:1.90 TPM:1.45
1746 A_BomoASG_c12441_g2_i1
224bp
FPKM:2.41 TPM:1.85
1747 A_BomoASG_c12443_g1_i1
201bp
FPKM:6.70 TPM:5.14
1748 A_BomoASG_c12445_g1_i1
472bp
 uncharacterized_protein_LOC105841430_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.48 TPM:1.14
1749 A_BomoASG_c12446_g1_i1
327bp
FPKM:3.74 TPM:2.87
1750 A_BomoASG_c12448_g1_i1
346bp
FPKM:1.23 TPM:0.94
1751 A_BomoASG_c12449_g1_i1
581bp
FPKM:3.87 TPM:2.97
1752 A_BomoASG_c12451_g1_i1
380bp
 NCK-interacting_protein_with_SH3_domain_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005882 C intermediate filament
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007010 P cytoskeleton organization
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008180 C COP9 signalosome
GO:0010976 P positive regulation of neuron projection development
GO:0017124 F SH3 domain binding
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
FPKM:3.65 TPM:2.80
1753 A_BomoASG_c12453_g1_i1
282bp
 cadherin-23_[Bombyx_mori]
GO:0001764 P neuron migration
GO:0001932 P regulation of protein phosphorylation
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007413 P axonal fasciculation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032880 P regulation of protein localization
GO:0036514 P dopaminergic neuron axon guidance
GO:0036515 P serotonergic neuron axon guidance
GO:0042384 P cilium assembly
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
FPKM:5.49 TPM:4.21
1754 A_BomoASG_c12454_g1_i1
288bp
FPKM:10.05 TPM:7.71
1755 A_BomoASG_c12455_g1_i1
360bp
FPKM:4.00 TPM:3.07
1756 A_BomoASG_c12456_g1_i1
404bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like,_partial_[Diaphorina_citri]
FPKM:1.65 TPM:1.27
1757 A_BomoASG_c12457_g1_i1
473bp
FPKM:1.66 TPM:1.28
1758 A_BomoASG_c12457_g1_i2
483bp
FPKM:0.00 TPM:0.00
1759 A_BomoASG_c12458_g1_i1
456bp
 heat_shock_protein_hsp21.4_[Bombyx_mori]
FPKM:1.36 TPM:1.04
1760 A_BomoASG_c12458_g1_i2
349bp
 heat_shock_protein_30C_isoform_X1_[Helicoverpa_armigera]
GO:0005212 F structural constituent of eye lens
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006937 P regulation of muscle contraction
GO:0042803 F protein homodimerization activity
FPKM:2.12 TPM:1.63
1761 A_BomoASG_c12459_g1_i1
580bp
 peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:4.02 TPM:3.08
1762 A_BomoASG_c1245_g1_i1
232bp
FPKM:2.92 TPM:2.24
1763 A_BomoASG_c12460_g1_i1
2395bp
 chitobiosyldiphosphodolichol_beta-mannosyltransferase_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004578 F chitobiosyldiphosphodolichol beta-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097502 P mannosylation
FPKM:35.20 TPM:27.00
1764 A_BomoASG_c12461_g1_i1
637bp
 uncharacterized_protein_LOC110385832_[Bombyx_mori]
FPKM:2.44 TPM:1.87
1765 A_BomoASG_c12462_g1_i1
379bp
FPKM:4.45 TPM:3.41
1766 A_BomoASG_c12463_g1_i1
206bp
FPKM:16.50 TPM:12.66
1767 A_BomoASG_c12464_g1_i1
645bp
 uncharacterized_protein_LOC101740309_isoform_X3_[Bombyx_mori]
FPKM:3.00 TPM:2.30
1768 A_BomoASG_c12465_g1_i1
411bp
FPKM:7.34 TPM:5.63
1769 A_BomoASG_c12467_g1_i1
331bp
FPKM:2.33 TPM:1.78
1770 A_BomoASG_c12469_g1_i1
239bp
FPKM:3.37 TPM:2.59
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