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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1471 A_BomoASG_c12166_g1_i1
456bp
FPKM:1.37 TPM:1.05
1472 A_BomoASG_c12167_g1_i1
201bp
hCG2014340_[Homo_sapiens]
FPKM:0.00 TPM:0.00
1473 A_BomoASG_c12168_g1_i1
403bp
FPKM:3.08 TPM:2.36
1474 A_BomoASG_c12170_g1_i1
472bp
 NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_subunit_2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:166.60 TPM:127.79
1475 A_BomoASG_c12171_g1_i1
875bp
FPKM:1.88 TPM:1.44
1476 A_BomoASG_c12172_g1_i1
230bp
FPKM:3.73 TPM:2.86
1477 A_BomoASG_c12173_g1_i1
279bp
FPKM:4.68 TPM:3.59
1478 A_BomoASG_c12174_g1_i1
273bp
FPKM:2.45 TPM:1.88
1479 A_BomoASG_c12175_g1_i1
1152bp
 actin-like_protein_6A_[Bombyx_mori]
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003407 P neural retina development
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0021510 P spinal cord development
GO:0031011 C Ino80 complex
GO:0031492 F nucleosomal DNA binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0071564 C npBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:19.05 TPM:14.61
1480 A_BomoASG_c12176_g1_i1
538bp
 A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_16_[Bombyx_mori]
FPKM:2.92 TPM:2.24
1481 A_BomoASG_c12178_g1_i1
363bp
FPKM:2.82 TPM:2.16
1482 A_BomoASG_c12179_g1_i1
1614bp
 LOW_QUALITY_PROTEIN:_coiled-coil_domain-containing_protein_51_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:56.90 TPM:43.65
1483 A_BomoASG_c1217_g1_i1
291bp
 titin2_[Bombyx_mori]
FPKM:2.57 TPM:1.97
1484 A_BomoASG_c12181_g1_i1
1373bp
 microsomal_glutathione_S-transferase_1-like_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0070207 P protein homotrimerization
FPKM:54.73 TPM:41.98
1485 A_BomoASG_c12182_g1_i1
525bp
 PREDICTED:_uncharacterized_protein_LOC106134236_[Amyelois_transitella]
FPKM:1.75 TPM:1.34
1486 A_BomoASG_c12184_g1_i1
342bp
 uncharacterized_protein_LOC105841979_[Bombyx_mori]
FPKM:4.38 TPM:3.36
1487 A_BomoASG_c12185_g1_i1
276bp
 pol_polyprotein,_partial_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.92 TPM:1.47
1488 A_BomoASG_c12186_g1_i1
261bp
FPKM:2.72 TPM:2.08
1489 A_BomoASG_c12187_g1_i1
932bp
 NAD-dependent_protein_deacylase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006476 P protein deacetylation
GO:0008270 F zinc ion binding
GO:0010566 P regulation of ketone biosynthetic process
GO:0016787 F hydrolase activity
GO:0036046 P protein demalonylation
GO:0036047 P peptidyl-lysine demalonylation
GO:0036048 P protein desuccinylation
GO:0036049 P peptidyl-lysine desuccinylation
GO:0036054 F protein-malonyllysine demalonylase activity
GO:0036055 F protein-succinyllysine desuccinylase activity
GO:0046872 F metal ion binding
GO:0061697 F protein-glutaryllysine deglutarylase activity
GO:0061698 P protein deglutarylation
GO:0061699 P peptidyl-lysine deglutarylation
GO:0070403 F NAD+ binding
GO:2000378 P negative regulation of reactive oxygen species metabolic process
FPKM:17.00 TPM:13.04
1490 A_BomoASG_c1218_g1_i1
217bp
FPKM:1.76 TPM:1.35
1491 A_BomoASG_c12191_g1_i1
385bp
FPKM:5.61 TPM:4.30
1492 A_BomoASG_c12192_g1_i1
423bp
FPKM:3.94 TPM:3.02
1493 A_BomoASG_c12193_g1_i1
1947bp
 uncharacterized_protein_LOC101738082_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
FPKM:45.94 TPM:35.24
1494 A_BomoASG_c12194_g1_i1
643bp
FPKM:3.50 TPM:2.68
1495 A_BomoASG_c12195_g1_i1
269bp
 hypothetical_protein,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005524 F ATP binding
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
FPKM:5.58 TPM:4.28
1496 A_BomoASG_c12196_g1_i1
408bp
FPKM:53.82 TPM:41.28
1497 A_BomoASG_c12197_g1_i1
594bp
 NADH_dehydrogenase_(ubiquinone)_1_alpha_subcomplex,_13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006915 P apoptotic process
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0097190 P apoptotic signaling pathway
GO:0097191 P extrinsic apoptotic signaling pathway
FPKM:52.95 TPM:40.62
1498 A_BomoASG_c12198_g1_i1
427bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.89 TPM:2.98
1499 A_BomoASG_c12199_g1_i1
266bp
 THAP_domain-containing_protein_9_[Cyphomyrmex_costatus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:2.60 TPM:1.99
1500 A_BomoASG_c121_g1_i1
212bp
 uncharacterized_protein_LOC110385404_[Bombyx_mori]
FPKM:4.72 TPM:3.62
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