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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1501 A_BomoASG_c12200_g1_i1
564bp
FPKM:2.01 TPM:1.54
1502 A_BomoASG_c12201_g1_i1
542bp
 unconventional_myosin-Ia-like_[Helicoverpa_armigera]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
FPKM:2.28 TPM:1.75
1503 A_BomoASG_c12202_g1_i1
864bp
 phosphatidylinositol-glycan_biosynthesis_class_F_protein_[Bombyx_mori]
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
FPKM:62.76 TPM:48.14
1504 A_BomoASG_c12203_g1_i1
317bp
FPKM:0.00 TPM:0.00
1505 A_BomoASG_c12203_g1_i2
302bp
FPKM:0.40 TPM:0.30
1506 A_BomoASG_c12204_g1_i1
215bp
FPKM:4.52 TPM:3.47
1507 A_BomoASG_c12205_g1_i1
360bp
 uncharacterized_protein_LOC101735450_isoform_X1_[Bombyx_mori]
FPKM:3.72 TPM:2.85
1508 A_BomoASG_c12206_g1_i1
493bp
 type_I_inositol_1,4,5-trisphosphate_5-phosphatase_isoform_X2_[Bombyx_mori]
GO:0004445 F inositol-polyphosphate 5-phosphatase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0052658 F inositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0052659 F inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity
FPKM:2.44 TPM:1.87
1509 A_BomoASG_c12207_g1_i1
301bp
 N-alpha-acetyltransferase_38,_NatC_auxiliary_subunit_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0031417 C NatC complex
GO:0043066 P negative regulation of apoptotic process
FPKM:2.00 TPM:1.53
1510 A_BomoASG_c12208_g1_i1
931bp
 myristoylated_alanine-rich_C-kinase_substrate_[Bombyx_mori]
FPKM:59.51 TPM:45.64
1511 A_BomoASG_c12208_g1_i2
906bp
 myristoylated_alanine-rich_C-kinase_substrate_[Bombyx_mori]
FPKM:11.21 TPM:8.60
1512 A_BomoASG_c1220_g1_i1
231bp
 uncharacterized_protein_LOC101741232_[Bombyx_mori]
FPKM:3.69 TPM:2.83
1513 A_BomoASG_c12210_g1_i1
216bp
 uncharacterized_protein_LOC101737360_[Bombyx_mori]
FPKM:1.78 TPM:1.37
1514 A_BomoASG_c12212_g1_i1
334bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:7.84 TPM:6.02
1515 A_BomoASG_c12213_g1_i1
204bp
FPKM:8.51 TPM:6.53
1516 A_BomoASG_c12214_g1_i1
416bp
 phospholipase_A1_member_A_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0044241 P lipid digestion
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2.02 TPM:1.55
1517 A_BomoASG_c12215_g1_i1
282bp
FPKM:0.91 TPM:0.70
1518 A_BomoASG_c12216_g1_i1
314bp
FPKM:1.84 TPM:1.41
1519 A_BomoASG_c12217_g1_i1
240bp
FPKM:2.67 TPM:2.05
1520 A_BomoASG_c12218_g1_i1
214bp
FPKM:7.34 TPM:5.63
1521 A_BomoASG_c12219_g1_i1
220bp
FPKM:1.69 TPM:1.30
1522 A_BomoASG_c12220_g1_i1
569bp
FPKM:6.68 TPM:5.12
1523 A_BomoASG_c12221_g1_i1
694bp
 exopolyphosphatase_PRUNE1_isoform_X2_[Bombyx_mori]
FPKM:1.97 TPM:1.51
1524 A_BomoASG_c12222_g1_i1
283bp
FPKM:3.63 TPM:2.78
1525 A_BomoASG_c12223_g1_i1
508bp
 polyprotein_[Blattella_germanica]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.67 TPM:2.04
1526 A_BomoASG_c12224_g1_i1
1051bp
FPKM:46.00 TPM:35.29
1527 A_BomoASG_c12226_g1_i1
2043bp
 poly(A)-specific_ribonuclease_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:22.50 TPM:17.26
1528 A_BomoASG_c12226_g1_i2
1970bp
 poly(A)-specific_ribonuclease_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:4.33 TPM:3.32
1529 A_BomoASG_c12227_g1_i1
622bp
 paired_box_protein_and_transposase_domain_containing_protein_[Lasius_niger]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.51 TPM:1.16
1530 A_BomoASG_c12228_g1_i1
315bp
FPKM:2.55 TPM:1.96
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