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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1441 A_BomoASG_c12130_g1_i1
212bp
FPKM:0.94 TPM:0.72
1442 A_BomoASG_c12132_g1_i1
1592bp
 proteasome_26S_non-ATPase_subunit_4_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008134 F transcription factor binding
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043248 P proteasome assembly
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:67.01 TPM:51.40
1443 A_BomoASG_c12133_g1_i1
1104bp
 uncharacterized_protein_LOC101741342_[Bombyx_mori]
FPKM:10.99 TPM:8.43
1444 A_BomoASG_c12133_g1_i2
1052bp
 uncharacterized_protein_LOC101741342_[Bombyx_mori]
FPKM:53.52 TPM:41.05
1445 A_BomoASG_c12134_g1_i1
293bp
FPKM:3.80 TPM:2.91
1446 A_BomoASG_c12136_g1_i1
250bp
FPKM:3.61 TPM:2.77
1447 A_BomoASG_c12138_g1_i1
393bp
FPKM:0.49 TPM:0.38
1448 A_BomoASG_c12139_g1_i1
333bp
FPKM:3.94 TPM:3.02
1449 A_BomoASG_c12140_g1_i1
250bp
FPKM:7.83 TPM:6.00
1450 A_BomoASG_c12143_g1_i1
229bp
FPKM:6.04 TPM:4.64
1451 A_BomoASG_c12144_g1_i1
320bp
FPKM:3.90 TPM:2.99
1452 A_BomoASG_c12145_g1_i1
351bp
FPKM:0.90 TPM:0.69
1453 A_BomoASG_c12147_g1_i1
1992bp
 glutamine_synthetase_2_cytoplasmic_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006538 P glutamate catabolic process
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0007416 P synapse assembly
GO:0016874 F ligase activity
GO:0045213 P neurotransmitter receptor metabolic process
FPKM:117.27 TPM:89.95
1454 A_BomoASG_c12148_g1_i1
233bp
FPKM:2.88 TPM:2.21
1455 A_BomoASG_c12149_g1_i1
273bp
FPKM:8.34 TPM:6.40
1456 A_BomoASG_c12150_g1_i1
482bp
 cytochrome_c_oxidase_subunit_6B1_isoform_X2_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:1902600 P proton transmembrane transport
FPKM:292.38 TPM:224.26
1457 A_BomoASG_c12151_g1_i1
1142bp
 protein_SEC13_homolog_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0031080 C nuclear pore outer ring
GO:0031410 C cytoplasmic vesicle
GO:0032008 P positive regulation of TOR signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0051028 P mRNA transport
GO:0061700 C GATOR2 complex
GO:0070062 C extracellular exosome
FPKM:136.53 TPM:104.73
1458 A_BomoASG_c12153_g1_i1
477bp
 putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
FPKM:2.56 TPM:1.96
1459 A_BomoASG_c12154_g1_i1
957bp
 uncharacterized_protein_LOC101746338_[Bombyx_mori]
FPKM:101.63 TPM:77.95
1460 A_BomoASG_c12156_g1_i1
533bp
FPKM:28.47 TPM:21.84
1461 A_BomoASG_c12157_g1_i1
741bp
FPKM:28.15 TPM:21.59
1462 A_BomoASG_c12158_g1_i1
853bp
 peptidyl-tRNA_hydrolase_ICT1,_mitochondrial_[Bombyx_mori]
GO:0003747 F translation release factor activity
GO:0004045 F aminoacyl-tRNA hydrolase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006412 P translation
GO:0006415 P translational termination
GO:0016150 F translation release factor activity, codon nonspecific
GO:0016787 F hydrolase activity
GO:0070126 P mitochondrial translational termination
FPKM:25.92 TPM:19.88
1463 A_BomoASG_c12159_g1_i1
551bp
FPKM:6.54 TPM:5.01
1464 A_BomoASG_c1215_g1_i1
239bp
FPKM:6.07 TPM:4.66
1465 A_BomoASG_c12160_g1_i1
242bp
FPKM:7.18 TPM:5.51
1466 A_BomoASG_c12161_g1_i1
258bp
FPKM:2.23 TPM:1.71
1467 A_BomoASG_c12162_g1_i1
599bp
FPKM:1.72 TPM:1.32
1468 A_BomoASG_c12163_g1_i1
854bp
 glutathione_S-transferae_zeta_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004364 F glutathione transferase activity
GO:0005737 C cytoplasm
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0006749 P glutathione metabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016034 F maleylacetoacetate isomerase activity
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
FPKM:26.81 TPM:20.57
1469 A_BomoASG_c12164_g1_i1
546bp
 UPF0389_protein_CG9231_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
FPKM:77.19 TPM:59.20
1470 A_BomoASG_c12165_g1_i1
271bp
 PREDICTED:_zinc_finger_BED_domain-containing_protein_4-like_[Agrilus_planipennis]
FPKM:0.50 TPM:0.38
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