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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12175_g1_i1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		actin-like_protein_6A_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003407 P neural retina development
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0021510 P spinal cord development
GO:0031011 C Ino80 complex
GO:0031492 F nucleosomal DNA binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0071564 C npBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:19.05 TPM:14.61
ORF EntryO_BomoASG1891_3prime_partial:A_BomoASG_c12175_g1_i1
Sequence
(Nucleotide)
TGTCAAAAGAAACAACAAACGCGCTGGGCATTGTCGTTTATTTCATAGATAATAATACAT
AGTATGTTTATTATTTTTAATTAAATGAAAATAAAATTTTTACAATAGCATTATAAAAGA
ATATATTATGAGTGGCCCGAACGGCATGCTGTACGGGGGAGACGAGATAGGTGCACTAGT
CTTTGATCCTGGTCATCATTCGTTGCGAGTTGGTTATGCACAAGAGGATACCCCAAAAGC
TGATATACCAGCAGTTGTGGGCGTCGGACCAGCTACACACATCCCAAATTCCGAAGAAAA
GGTTCCTGATGGCAACATCACGCAAACCGGCAGTAAAACGGGCAGTGAGCTGCGACACTA
CATAGACGTCACAGAGCTCCACGTTCCGCGTCCGGGAATGGAAGTGCAGACGTACATGAA
AGACGGACAAGTCGACAACTGGGATCTGTTTGAGAAGATGCTTGATTATTGTTATTCTAA
GGTAATCCGCTCCCCATCAGAGCACCATCCAGTACTCTTCACTGAGGCAGTCTGGGCCAC
CCGGCCAGTGAGGGAGAAGCTAGCCGAACTCATATTCGAGAAGTATCAAGCACCAGCTTT
CTTCCTGGTCAAGAATGCTGTCCTAGTGGCCTTTGCAAATGGAAAATCTACAGCTCTGGT
CATAGACGCTGGAGCCACACAGACATCAGCCGTGCCTGTTATCGATGGGTACGCGCTGGT
GAGTGCGGCGGCGCGCTCTGCGCTGGGCGGGGACCACCTGGTGGCGCAGGCCAAGCTGAT
GCTGAACGCGGCGCACATACAGATGCTGCCCATCTACAGCATACAGAGCAAGGAAGTGAT
AAGAGAGCGCGAGCGAGCCCGGTACACGCTGAAGTCTCTCCCGGCCGGCCTCACGCAGTC
CTGGCAGCAGTACATGCTGAAGCGCCAGTACGAAGACTTCTGTCACTGCATAGCCCAGGT
GTCCGAGTCCGCGTACGACGAGCGCACGGCCGCGTCGGTCCCCGGGGTGCACTACGAGTT
CCCGGGCGGCTACCACCAGGACTTCGGCCCGGAGCGGTTCAAACTAACCGAGACGCTGTT
CGAGAGCTCCCTGGCCGCCCCCCACCTGGCGTGCGCGGCGGCGGCGGCGTGCGACGCAGA
CGCGCGGCCGGC
(1152 bp)

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