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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
511 A_BomoN4EE_TR100308_c0_g1_i1
539bp
 hypothetical_protein_KGM_19898_[Danaus_plexippus]
FPKM:0.17 TPM:0.22
512 A_BomoN4EE_TR100309_c0_g1_i1
496bp
 PREDICTED:_phosphatidate_cytidylyltransferase,_mitochondrial-like_[Ciona_intestinalis]
FPKM:0.29 TPM:0.38
513 A_BomoN4EE_TR10030_c0_g1_i1
383bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:0.46 TPM:0.61
514 A_BomoN4EE_TR100310_c0_g1_i1
310bp
FPKM:1.21 TPM:1.61
515 A_BomoN4EE_TR100311_c0_g1_i1
676bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.36 TPM:0.48
516 A_BomoN4EE_TR100312_c0_g1_i1
668bp
FPKM:0.24 TPM:0.33
517 A_BomoN4EE_TR100313_c0_g1_i1
481bp
FPKM:0.50 TPM:0.67
518 A_BomoN4EE_TR100314_c0_g1_i1
2543bp
 PREDICTED:_peregrin-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:7.38 TPM:9.83
519 A_BomoN4EE_TR100315_c0_g1_i1
428bp
FPKM:0.37 TPM:0.49
520 A_BomoN4EE_TR100316_c0_g1_i1
330bp
FPKM:0.42 TPM:0.55
521 A_BomoN4EE_TR100317_c0_g1_i1
6611bp
 PREDICTED:_homeobox_protein_cut_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007469 P antennal development
GO:0007605 P sensory perception of sound
GO:0008052 P sensory organ boundary specification
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048098 P antennal joint development
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0060288 P formation of a compartment boundary
GO:0061332 P Malpighian tubule bud morphogenesis
GO:0070983 P dendrite guidance
FPKM:17.15 TPM:22.84
522 A_BomoN4EE_TR100318_c0_g1_i1
507bp
 PREDICTED:_protein_ultraspiracle_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:0.19 TPM:0.25
523 A_BomoN4EE_TR100318_c0_g2_i1
485bp
 PREDICTED:_protein_ultraspiracle_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:1.09 TPM:1.45
524 A_BomoN4EE_TR100318_c0_g3_i1
475bp
 PREDICTED:_protein_ultraspiracle_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
525 A_BomoN4EE_TR100319_c0_g1_i1
645bp
 PREDICTED:_TATA-box-binding_protein_[Plutella_xylostella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006402 P mRNA catabolic process
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
FPKM:8.52 TPM:11.35
526 A_BomoN4EE_TR100319_c0_g2_i1
1343bp
 PREDICTED:_TATA-box-binding_protein-like_[Papilio_polytes]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006402 P mRNA catabolic process
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
FPKM:20.40 TPM:27.17
527 A_BomoN4EE_TR10031_c0_g1_i1
225bp
FPKM:1.26 TPM:1.67
528 A_BomoN4EE_TR100320_c0_g1_i1
408bp
FPKM:0.67 TPM:0.90
529 A_BomoN4EE_TR100320_c1_g1_i1
351bp
FPKM:0.55 TPM:0.73
530 A_BomoN4EE_TR100321_c0_g1_i1
1264bp
 Sodium/potassium/calcium_exchanger_4,_partial_[Operophtera_brumata]
FPKM:0.70 TPM:0.94
531 A_BomoN4EE_TR100322_c0_g1_i1
482bp
FPKM:0.40 TPM:0.53
532 A_BomoN4EE_TR100322_c1_g1_i1
774bp
FPKM:0.25 TPM:0.33
533 A_BomoN4EE_TR100323_c0_g1_i1
2505bp
 PREDICTED:_uncharacterized_protein_LOC101739413_[Bombyx_mori]
FPKM:2.91 TPM:3.88
534 A_BomoN4EE_TR100323_c0_g2_i1
2504bp
 PREDICTED:_uncharacterized_protein_LOC101739413_[Bombyx_mori]
FPKM:22.88 TPM:30.47
535 A_BomoN4EE_TR100324_c0_g1_i1
340bp
 PREDICTED:_probable_cardiolipin_synthase_(CMP-forming)_isoform_X1_[Papilio_xuthus]
FPKM:2.73 TPM:3.63
536 A_BomoN4EE_TR100325_c0_g1_i1
869bp
FPKM:12.61 TPM:16.79
537 A_BomoN4EE_TR100326_c0_g1_i1
1765bp
 uncharacterized_protein_Dmoj_GI26865_[Drosophila_mojavensis]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
FPKM:9.85 TPM:13.12
538 A_BomoN4EE_TR100326_c0_g2_i1
857bp
 PREDICTED:_tigger_transposable_element-derived_protein_4-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
FPKM:0.54 TPM:0.71
539 A_BomoN4EE_TR100327_c0_g1_i1
299bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.26 TPM:0.35
540 A_BomoN4EE_TR100328_c0_g1_i1
2473bp
 PREDICTED:_ras-related_protein_Rab-21_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005925 C focal adhesion
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008089 P anterograde axonal transport
GO:0008152 P metabolic process
GO:0009898 C cytoplasmic side of plasma membrane
GO:0012506 C vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017157 P regulation of exocytosis
GO:0019003 F GDP binding
GO:0030516 P regulation of axon extension
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032154 C cleavage furrow
GO:0032580 C Golgi cisterna membrane
GO:0043005 C neuron projection
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0070062 C extracellular exosome
GO:0098559 C cytoplasmic side of early endosome membrane
GO:1904115 C axon cytoplasm
GO:2000643 P positive regulation of early endosome to late endosome transport
FPKM:1.45 TPM:1.93
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