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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
481 A_BomoN4EE_TR100283_c0_g1_i1
306bp
 hypothetical_protein_[Papilio_dardanus]
FPKM:0.75 TPM:1.00
482 A_BomoN4EE_TR100284_c0_g1_i1
387bp
 PREDICTED:_microtubule-associated_protein_futsch-like_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008017 F microtubule binding
GO:0008088 P axo-dendritic transport
GO:0008355 P olfactory learning
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015630 C microtubule cytoskeleton
GO:0019900 F kinase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0043524 P negative regulation of neuron apoptotic process
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0060052 P neurofilament cytoskeleton organization
GO:1901215 P negative regulation of neuron death
FPKM:0.60 TPM:0.79
483 A_BomoN4EE_TR100285_c0_g1_i1
1226bp
FPKM:0.53 TPM:0.71
484 A_BomoN4EE_TR100286_c0_g1_i1
508bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:6.99 TPM:9.31
485 A_BomoN4EE_TR100287_c0_g1_i1
1526bp
 isocitrate_dehydrogenase_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004450 F isocitrate dehydrogenase (NADP+) activity
GO:0005737 C cytoplasm
GO:0006097 P glyoxylate cycle
GO:0006099 P tricarboxylic acid cycle
GO:0006102 P isocitrate metabolic process
GO:0006103 P 2-oxoglutarate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:142.85 TPM:190.28
486 A_BomoN4EE_TR100288_c0_g1_i1
287bp
FPKM:0.29 TPM:0.39
487 A_BomoN4EE_TR100289_c0_g1_i1
340bp
 PREDICTED:_polyhomeotic_isoform_X2_[Bombyx_mori]
FPKM:0.58 TPM:0.78
488 A_BomoN4EE_TR10028_c0_g1_i1
540bp
FPKM:0.25 TPM:0.33
489 A_BomoN4EE_TR100290_c0_g1_i1
4236bp
 PREDICTED:_protein_ariadne-1_[Papilio_polytes]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:35.33 TPM:47.06
490 A_BomoN4EE_TR100291_c0_g1_i1
933bp
 hypothetical_protein_KGM_16514_[Danaus_plexippus]
GO:0004074 F biliverdin reductase (NAD(P)+) activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016491 F oxidoreductase activity
GO:0042167 P heme catabolic process
GO:0042602 F riboflavin reductase (NADPH) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
FPKM:121.50 TPM:161.85
491 A_BomoN4EE_TR100291_c1_g1_i1
1458bp
 PREDICTED:_uncharacterized_protein_LOC106137868_[Amyelois_transitella]
FPKM:1.42 TPM:1.89
492 A_BomoN4EE_TR100292_c0_g1_i1
482bp
FPKM:0.50 TPM:0.67
493 A_BomoN4EE_TR100293_c0_g1_i1
274bp
 serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:18.01 TPM:23.99
494 A_BomoN4EE_TR100294_c0_g1_i1
431bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.49 TPM:0.65
495 A_BomoN4EE_TR100295_c0_g1_i1
574bp
FPKM:0.53 TPM:0.71
496 A_BomoN4EE_TR100296_c0_g1_i1
3662bp
 PREDICTED:_putative_ATP-dependent_RNA_helicase_me31b_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007279 P pole cell formation
GO:0010494 C cytoplasmic stress granule
GO:0010501 P RNA secondary structure unwinding
GO:0010906 P regulation of glucose metabolic process
GO:0016787 F hydrolase activity
GO:0030707 P ovarian follicle cell development
GO:0033962 P P-body assembly
GO:0035195 P gene silencing by miRNA
GO:0043186 C P granule
GO:0046959 P habituation
GO:0050688 P regulation of defense response to virus
GO:0090328 P regulation of olfactory learning
FPKM:198.08 TPM:263.84
497 A_BomoN4EE_TR100297_c0_g1_i1
447bp
FPKM:0.00 TPM:0.00
498 A_BomoN4EE_TR100298_c0_g1_i1
2361bp
 PREDICTED:_protein_C12orf4_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0043304 P regulation of mast cell degranulation
FPKM:14.00 TPM:18.64
499 A_BomoN4EE_TR100298_c0_g2_i1
2362bp
 PREDICTED:_protein_C12orf4_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0043304 P regulation of mast cell degranulation
FPKM:0.47 TPM:0.63
500 A_BomoN4EE_TR100299_c0_g1_i1
738bp
FPKM:0.21 TPM:0.28
501 A_BomoN4EE_TR10029_c0_g1_i1
353bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Bombyx_mori]
FPKM:1.44 TPM:1.91
502 A_BomoN4EE_TR1002_c0_g1_i1
366bp
FPKM:0.50 TPM:0.67
503 A_BomoN4EE_TR100300_c0_g1_i1
1858bp
 PREDICTED:_S-phase_kinase-associated_protein_2-like_[Papilio_polytes]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051726 P regulation of cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0071460 P cellular response to cell-matrix adhesion
GO:1902916 P positive regulation of protein polyubiquitination
FPKM:21.09 TPM:28.09
504 A_BomoN4EE_TR100301_c0_g1_i1
1315bp
 26S_proteasome_non-ATPase_regulatory_subunit_13_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007127 P meiosis I
GO:0008541 C proteasome regulatory particle, lid subcomplex
GO:0016020 C membrane
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070062 C extracellular exosome
FPKM:162.61 TPM:216.60
505 A_BomoN4EE_TR100302_c0_g1_i1
417bp
FPKM:0.00 TPM:0.00
506 A_BomoN4EE_TR100303_c0_g1_i1
1879bp
 PREDICTED:_annulin_isoform_X3_[Bombyx_mori]
GO:0003810 F protein-glutamine gamma-glutamyltransferase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018149 P peptide cross-linking
GO:0046872 F metal ion binding
FPKM:1.10 TPM:1.47
507 A_BomoN4EE_TR100304_c0_g1_i1
1163bp
FPKM:0.77 TPM:1.03
508 A_BomoN4EE_TR100305_c0_g1_i1
1449bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:5.72 TPM:7.62
509 A_BomoN4EE_TR100306_c0_g1_i1
1027bp
 heat_shock_protein_hsp23.7_precursor_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
FPKM:18.84 TPM:25.09
510 A_BomoN4EE_TR100307_c0_g1_i1
626bp
 PREDICTED:_glutamate_receptor_ionotropic,_kainate_3_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007268 P chemical synaptic transmission
GO:0007399 P nervous system development
GO:0008144 F obsolete drug binding
GO:0008328 C ionotropic glutamate receptor complex
GO:0015277 F kainate selective glutamate receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016595 F glutamate binding
GO:0022843 F voltage-gated cation channel activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032229 P negative regulation of synaptic transmission, GABAergic
GO:0032230 P positive regulation of synaptic transmission, GABAergic
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043195 C terminal bouton
GO:0043235 C receptor complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048167 P regulation of synaptic plasticity
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0051967 P negative regulation of synaptic transmission, glutamatergic
FPKM:0.74 TPM:0.98
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