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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
541 A_BomoN4EE_TR100328_c0_g1_i2
2640bp
 PREDICTED:_ras-related_protein_Rab-21_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005925 C focal adhesion
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008089 P anterograde axonal transport
GO:0008152 P metabolic process
GO:0009898 C cytoplasmic side of plasma membrane
GO:0012506 C vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017157 P regulation of exocytosis
GO:0019003 F GDP binding
GO:0030516 P regulation of axon extension
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032154 C cleavage furrow
GO:0032580 C Golgi cisterna membrane
GO:0043005 C neuron projection
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0070062 C extracellular exosome
GO:0098559 C cytoplasmic side of early endosome membrane
GO:1904115 C axon cytoplasm
GO:2000643 P positive regulation of early endosome to late endosome transport
FPKM:7.33 TPM:9.77
542 A_BomoN4EE_TR100328_c0_g2_i1
2072bp
 PREDICTED:_ras-related_protein_Rab-21_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005925 C focal adhesion
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008089 P anterograde axonal transport
GO:0008152 P metabolic process
GO:0009898 C cytoplasmic side of plasma membrane
GO:0012506 C vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017157 P regulation of exocytosis
GO:0019003 F GDP binding
GO:0030516 P regulation of axon extension
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032154 C cleavage furrow
GO:0032580 C Golgi cisterna membrane
GO:0043005 C neuron projection
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0070062 C extracellular exosome
GO:0098559 C cytoplasmic side of early endosome membrane
GO:1904115 C axon cytoplasm
GO:2000643 P positive regulation of early endosome to late endosome transport
FPKM:0.00 TPM:0.00
543 A_BomoN4EE_TR100329_c0_g1_i1
298bp
FPKM:0.00 TPM:0.00
544 A_BomoN4EE_TR100329_c0_g2_i1
297bp
FPKM:0.00 TPM:0.00
545 A_BomoN4EE_TR10032_c0_g1_i1
500bp
FPKM:0.28 TPM:0.38
546 A_BomoN4EE_TR100330_c0_g1_i1
233bp
 hypothetical_protein_COLSTE_00043_[Collinsella_stercoris_DSM_13279]
FPKM:5.54 TPM:7.39
547 A_BomoN4EE_TR100331_c1_g1_i1
565bp
FPKM:0.47 TPM:0.62
548 A_BomoN4EE_TR100332_c0_g1_i1
572bp
 ATP-dependent_DNA_helicase_[Helicobacter_winghamensis]
FPKM:1.38 TPM:1.83
549 A_BomoN4EE_TR100333_c0_g1_i1
558bp
 PREDICTED:_UNC93-like_protein_isoform_X2_[Amyelois_transitella]
FPKM:0.30 TPM:0.39
550 A_BomoN4EE_TR100333_c0_g2_i1
746bp
 putative_UNC93A_protein_[Danaus_plexippus]
FPKM:0.33 TPM:0.44
551 A_BomoN4EE_TR100333_c1_g1_i1
1060bp
 UNC93-like_protein_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.67 TPM:0.89
552 A_BomoN4EE_TR100334_c0_g1_i1
1017bp
 PREDICTED:_probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:0.99 TPM:1.32
553 A_BomoN4EE_TR100334_c0_g2_i1
369bp
 PREDICTED:_probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.56 TPM:2.08
554 A_BomoN4EE_TR100334_c0_g3_i1
1016bp
 PREDICTED:_probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:9.66 TPM:12.87
555 A_BomoN4EE_TR100335_c0_g1_i1
445bp
FPKM:0.34 TPM:0.46
556 A_BomoN4EE_TR100336_c0_g1_i1
2297bp
 putative_ATP-dependent_RNA_helicase_DDX51_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
FPKM:19.04 TPM:25.36
557 A_BomoN4EE_TR100337_c0_g1_i1
1093bp
FPKM:0.07 TPM:0.09
558 A_BomoN4EE_TR100337_c0_g2_i1
865bp
FPKM:0.34 TPM:0.45
559 A_BomoN4EE_TR100338_c0_g1_i1
6394bp
 PREDICTED:_uncharacterized_protein_LOC101744111_[Bombyx_mori]
FPKM:27.91 TPM:37.18
560 A_BomoN4EE_TR100338_c0_g1_i2
6395bp
 PREDICTED:_uncharacterized_protein_LOC101744111_[Bombyx_mori]
FPKM:4.24 TPM:5.65
561 A_BomoN4EE_TR100339_c0_g1_i1
247bp
Hypothetical_protein_RM25_1313_[Propionibacterium_freudenreichii_subsp._freudenreichii]
FPKM:1.82 TPM:2.43
562 A_BomoN4EE_TR100339_c0_g2_i1
252bp
Hypothetical_protein_RM25_1313_[Propionibacterium_freudenreichii_subsp._freudenreichii]
FPKM:0.00 TPM:0.00
563 A_BomoN4EE_TR10033_c0_g1_i1
239bp
 hypothetical_protein_[Pseudomonas_chlororaphis]
FPKM:1.02 TPM:1.35
564 A_BomoN4EE_TR100340_c0_g1_i1
2694bp
 PREDICTED:_traB_domain-containing_protein-like_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.16 TPM:1.55
565 A_BomoN4EE_TR100340_c0_g1_i2
2504bp
 PREDICTED:_traB_domain-containing_protein-like_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:6.38 TPM:8.50
566 A_BomoN4EE_TR100340_c0_g1_i3
2511bp
 PREDICTED:_traB_domain-containing_protein-like_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:10.32 TPM:13.75
567 A_BomoN4EE_TR100340_c0_g1_i4
2415bp
 PREDICTED:_traB_domain-containing_protein-like_isoform_X2_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.16 TPM:2.88
568 A_BomoN4EE_TR100341_c0_g1_i1
395bp
 hypothetical_protein_[Gallionella_capsiferriformans]
FPKM:0.43 TPM:0.57
569 A_BomoN4EE_TR100342_c0_g1_i1
577bp
FPKM:0.38 TPM:0.50
570 A_BomoN4EE_TR100342_c1_g1_i1
1285bp
 PREDICTED:_uncharacterized_protein_LOC105842323_[Bombyx_mori]
FPKM:0.74 TPM:0.99
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