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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100317_c0_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_homeobox_protein_cut_isoform_X4_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007469 P antennal development
GO:0007605 P sensory perception of sound
GO:0008052 P sensory organ boundary specification
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048098 P antennal joint development
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0060288 P formation of a compartment boundary
GO:0061332 P Malpighian tubule bud morphogenesis
GO:0070983 P dendrite guidance
Transcript
Level		FPKM:17.15 TPM:22.84
ORF EntryO_BomoN4EE50879_complete:A_BomoN4EE_TR100317_c0_g1_i1
Sequence
(Nucleotide)
TTAGCAATTTCTTTATTTTAAATTTTAATAAGTTTAGAAATCGTTCGGAGAGAAGACAAT
GGTTTCAGCATCATTACTTTTAATATTATGATATGAACAATAATAATTACCGCTATTTTA
TAATAATACCTCTATTAGTTAATAATGTTGATAACGCGTTATAACTATCTTCTACCTGTA
TTTACAATAATGCTATCACTTGAAACGTTACAACACAATAACAATTAGAATAATGTGAAA
TAATTTGTATGTGTTTTGTGTCTCAAAGTTCGTTCCTTAGAATATTGATGATGTAACAAA
ATACTTGAAGATCAATTTTAACAATCCAAAGTCTTTCTTGTTTAATTTACTAAGTAAAAT
TATAAGTTAAATAATAGTTTCATTTTTCTTTACATCTTATACAAAACTGTATCAGAATTG
AATACGAAAAGAGTTTACGATTAAAATTCATTGGAAGACTTACAGGTTAATTTTCATTTA
CATGTTGTCTTGAAATGGTTAAAAATTACAGTACTATATATTTGAAGTGGTTTGAGACAC
ACTACAAAAGATAACAATAATAAATTCAATAGAATGGTTGAAGCGATAAGCCGAGATAAA
ATAACATGTTATTTCCATATCACGTAGTATCTTAATTTTAAAATAGCTGGTATAACGTTA
TTGAAAACGGCTATTTCTCTTACTGTCAAACAGCCCTATTAATTTACTATTACATGCTAT
TCATAATGCTTACAATATTGTATAAATAACATCGATATGTATTGTTTTATTTTCTCCTAA
AACTGTCTTTGTTAAAAAATGAGACGTTTGTCACGAATACATTCGAAAAAACATTTCGTC
ACTTTTTTCGTTTTTATAAGATGCCTAACAAATTTCATTGTTTTTGGATACACATTTAAG
TAGGTCTGAAGTCATTTTCAGGAAATTAACGGTTAACGGTTCTAGGTAACTAATTAACTA
TATTATGTATGTATTCGATTATCTATAAGTTGTACATTTATTTAATTATTTACACTATAA
ACTGCAATTATTTACATCGTTGCAAGGATTGTGGTTCCCTCAAAATGTACATTTCACCTT
ATTCCTACCATTTAACAAAAGGACAATAGAGGAAAGAAAAAACTGAAATAATATTAAAAG
CAAGTTTTATTGCTAAAATAAAATACAAGCACAGCCGGAGCGAGGTGCGCGTCGCCGCGT
CGGTCGCGTGGCGGGCGCGGCGCCTCGCTCGGCTCAGCGTTTTTTGTACGTTTTCTTATC
TATCATTTAAAAGGAAGCCATTTTGAAATTTATAAAAATTAAATAGGTAGATAGTCTTCA
AAAACAAAAAGTAAAAAAGTAGAAAATCACAAGTTTGAGCGATCTCGCACGTCAATAGAA
AACATGTATGTAATAGATACAATAATATAGACTATAAAACTTTATAATTTAAAAGTAAAA
ATCTTAAAACCCAATTAATTCATAATATTTTATAACCTCTCCGGGTTCTCTATTAACATA
ATAATACTTTTCAACTGGGGTTCAGTAGACGATATCTTAAATTTACATCTGATTGCACTT
CAAGTTTCAACTAACAATAAAGGAAACTATAACTAAACGGTCTCAGGGAGCTGGTCCTCG
CCCCGCCCGCACACTGTCCGCCCGCCCACAGGCCGCCCGCACACCGGCCGCGCCGCAGTT
TTGGTATTCAGTGTATTTACAACGAGCAGCGGCTCGACGCGGGCCGCCCGAGGACAACTA
ACTACGTTAACAAATATTAAAGCAAATGCATCGTTTGTATCTCGAGTTCCCACAGAACGT
TACGCGGCTATCTACAGTCTTTGGCCTCACACTCGAACTAACCTACCCCGAGCGGCGCTC
AGTACTCCCACCGGTCGTCCTCGGCCTCCGACTTGATCTTGTCGTCGTGCAGCAGGCGCG
GCGGCGAGGGCGCGGGGTGCGGGGGGGCCGCCACGAGCGAGGGAGGGGGCGCGAGCGAAG
GGGGCGCGGGGGAGGGCTCCACGCGCACCGTCTCCTCGGAGTCGCGCCGGAAATCGTCGC
CGCGCATGACGCAGACGCCGTTGATGATGACTTCATCGGGGTTGCGCGGTTTCTCGTCCT
GCCAGTCCGGGTTGACCCACTGCGGCGCCGCAGGCTTCCGTCTGCTGGATCGACCCTGGG
GCGTCGAGGAAGCTTTCGGTTCAGTCTTAGATTCGTCGTCTAGCGAGTCCTCGGAGCCGA
GGTTGCTCTCGACGTCGTCGTCTTCGAAGTCGTCTCCATCAGGTTCGCGTTTCAACGGCA
TCGTGAGGTCGAGTCCACCGGCTGTGTCTTTGCCTTCTTCGGGAACAACGAGCCCGCGTC
CAATCAGCGCGGCGAGGTTCGAGTTCGCTGCAAAGTACGGAGGATAGGGGAGCGGAACCC
CGGCCAGGCCCATCCTCTCCTTCTGTAGTTCCAGCAGTCTCTGATTTAGAAGTAGCCTAA
ACTGAACGGGGTCGAAAGGCGCCGAGGACTGTTCTCGTGCCGGCGGCTCTGACGGTAGCC
CGTGGGGCGCCTGCTGTTTGAGCCTCATACGATGATTGTGGAACCAGTTCGTAATGGTAC
GGGTGGATAGCCCTAACTCGGCAGCCAGGAATTCTATTGTGGGCATATTGGGATACGGAT
CAAGGGCAAAAGCTAATCTCAGCGCTTCTTTCTGCTCTTCCGAGAACAAGACTCTTTGTT
TCTTAGCACAGGGAGCTCCAGAGTTGGGTCCGGGCGAACTGGAGTGGTAGAACTCAGAGG
TGTCGTTGGAGGAGGTGTCGGACGAGTTGTCCTGTCCGGGACCGCTCGACCGCCGCCGTT
TGTTCGCTTCGCGTCGTTCGTTCTTGAGCGCCTGAAGGCGGTCGATGTTGTGAGCGTCGC
TCAGCCAAAGCTGCATCCGAATGAAGGGCTCCCTACCTTTTATGCTTAACATGTGCCAAG
GTTTAGGTTTTGATAATAATTCGCTGACCGATCCCTGCGAGAGGCCGAGAACTGCTTCAC
CAAATATCTTTTGTCCGATATTATTCGCAAGCAAAGCTTCTTTTATTTTGGTCGTGATGG
TCTGCGTGTCGAGATCTTGCGTGAGAGCGGCCATTTCGTATACGCTGGGTGTCATGTGTT
GGTGCAGGGTCCGCATCACTGGAGGCTGGTGATGTGGCTGTGGAGGAGGCGGAGGTTTCC
TTTCCTTGTTGTTGTTGTCGTGGTGCTGCGGTGGCAGAGTGACGGCGTGGTGAGGAGGGA
ATCCAGGAGGGGTGAGCAGCAGCGGCGTGGGTTGTCCGAGATGTGCCAGGTGTCCCGGAC
CCAACAGTTGTTCTTGTTGCATTTTGCTCAGTAGAGACGTGGCGTCTGAGATCATTTTTT
GCGTCGGCGGCATCGGTTTGTTCATGTTTGGCGGACAAGGAGGTGCTCCGCTGTAGTTTC
CGGTTCTCATCAGTTTCTCGGGTGCAATCTTGTACTGTGACGCAACCAGCTTGTGAACAG
CATTATCGTCTTCTAAGAACATCTTCATCCTGATAAATGGCTCCCTTCCCTTTTGCGTAA
GCATATGCCAGGGCTTCGGTCTCGCTAACAAATCGCTGACCGATCCTTGAGAGAGACCAA
GAACTGACTCCCCAAACAAACGTTGGCTTATGGAGTACTGGCTTAATGCTTCCTTGACCC
GTCGGACTATCTCCTCCGTGTTCAAGTTGTTAAAGAGATCAAACTGTTGTTGGGTGATCG
GCGGTAGTACAGCTTTCATGGATCTTTGTGGCGGCGGATGGTGCGGGGGATTTGTTGGTT
GCGATATTAAGCTATTAGTTATTGAGGCCATTCTCTGCAAGGGGCTTGCCGCTGCTGAGC
TAGTAAAGTCCTCGTTGGGCGTGATCGCGGGTGGTAGAATAGCATTCCCTAGTGGGCTGG
AAGCAGACGACCCCGTGGACTGCTGTCCGGGCTCTAGCTTAGGTCGGACCAATGAGAACG
CACTACCTGCGTGGCGTATCGCCTCTTCGGCATCTAATGGCTTGTCCTTATCACTATCAG
TCATTCCGTTCATTTTCATAGTTTTGTCTTTCGGAAGAGACAAATCTTGAATGGCTCCCG
AGCCATTCATATGTTGGTTTTGAGCTTGCTGTATTGCCTGTTGCTGCAGGGCGAGCAGGT
TCGGAAAGGGCGGCATTCCTGGCAAGTTGTGGAGATTGGGAATGTTGGTCCCCGGCTGGA
GCTTAGCCAGCTCCCTGTGGTAGGCCTCGAGCGCCATGCGAATGTCCTCGGGCGGTCTCT
CCATGTGAGGAGCCATACCGCTGCTGAAAAAAGGGGGAAGCATGCCAGGGAAGCTATCTC
GGCTGTGGCGCATGTCTTCAACCCGCCTGGTCATGATCTTAGCCAGTTCCTCATGGTAGA
TGCGCACGACTTTATCCGGAGGAATGTCATCGTTTTCGTACTTCTTAAGTCTTCTGTTTT
GACTCGAATCCTTATTTGAAAACGGTGAGAGGCACTGGGTCCTTGGTGAGCTGGAATCCT
CATTACTCCTAGAATCATCATTATTGTGGTGTCCTGATGGGGTTTTCATAAGGTGTGAAG
CTTCGCTGAGCATGTGAGCAAGACGGTCGTCGCCTTCTCCTTCTGATCTACCGAAGCCGG
GACCTGGAGTGCCATCTTTCGTCCCTACTTTTTTAGGAATGAGAGACTTGAGGAGCATGA
TGGCGGCCTCGTCGCACGCCCACGCGTGCATCTTCCTGTACGAGTCGCGGCCCTTCTCCG
TCAGCTTGTCCCAGGGCTTCGGCTTCGAGAGCAGCTCGGACACCGTGCCCTGCGAGAGGC
CCAGCACGTACTTGGCGAACAGTCTCTGGCCGATGTTATGCACGGACAGCAGCTCCCGCA
CTTTGCGGCTGATGTGCAGCGTGTCCAGGTTGCTGTTCGCGTACTTGTCCATGTTGTACC
GGAGCATCTCCTGCAGCCGCGCCTCCATGGGGTCGCCCTTGGGGATCAGTGAGTCGCCCA
GCCGACCCACCAGCGCCCCCGGCGGCAGCGGACCCATGTCCTCCGCGAACCGATAGGGGC
GGTGCTCCTCAAACCTGAAGGGGCTGGGCGGCGGGAGGGGCAGCGGCGTGGGCCCGTTGT
TGTTGTGATGGGTCGTGTTGTTGTTGAGCGGCGGCGGGGTGCTGGGCCACTCCTCGGCAC
CTGCGTCTCGTCGCTCGGCGCTCCGCTCGCGCTCGGCGGGGCTCCGCTCGTCCAGTGTGG
GCGCGGCGCTCGGCGACCGGGGCGGCGCCGGCTTCCGCTCTAAGGACCTGTCGCACGACC
GCTCGCCGGCGCCGAGGTCCAACGATCGAAGCATGCTGATCTCCCGTTTGATATCGTCAT
AGTCCCTCTGGTTGTCCAGCCGCGCCTCCAGCCTCGCTATGTGTTGTTTCTTCTCATCTA
GACGCTCCTCCAGCCTCTGGAGCTGTTGTGCGTGGGCTTCTTGCAATGCTGACAGAGACG
CCTGCAGTCTTCTTACGTCTTCTACTAATTGAGCGATCTCTTTCTCTTTAGCTGCCAACT
CATTCTCCAAACTTCCTCCTTGAACGATAGGACTACTCCTAGATGAATTACTATTACTCC
TAGCCGTGGCAGCCATTTCCATCTTGTCTAAATCCTCATCAATTTCGGGGGTATGTCTCT
TCTCTTCTTTGATATCTGGACTATATCGGTCTATTCTAGTATCTGTGGGTTCCCTGGTTA
GGTCTAAGTGGGAGCCATTTGTCTTTGGTGGTATGTTGGCTTGGAGAGGCGTGGGGCTTG
TGGTCGCTAGCTGTTCCTTCAACGTGGTGACTTCTTTTTCGGCCAGTGTGGCTCTCTGTT
GCCAGAACTGCGCGAGTAGATAAATCCTCTCTTTCTTGAAGAGCCAGTCCATCGAGTGCA
TAGCTTGCACCTCCGCCTCGGGTGCGGCGGGGAGGCTGGCCGCGCCCGTGGGGTGCATCC
GGCTGGCCTCACGCCCGGCTCATGCCGCCGCCGTCACCAGCGCGACCGCACGCACTCGCC
GACCTCATTCACAAGCATTTCTTTACAGCAGCAATCAATTCGAGAATCGATTTTCCTTGA
GTCGAATGTTCTTTTATTAGGCGAGTTCGCGTGCCGTTTTCGCTTGTTTTCTAAGTCAGA
AGTCACAAACACAAGCTTTCTGTGTCCACAATCACTTTTTAGTTCAAAACAAATCACAGA
TATTCGTAATATTATTTGTTTCCCGCTGAACGACACACACGCACAGAGTGACAAAACGTT
TTATCAATATTACTAAATAAATCCACACTCGGGTCCGTGCGATACAACTCTCTCAAGTTC
GAGTCAAAGAAACAAAAACAATAAACTTGTCACACGAACTCAAAACGGATATTCGCGGCG
AAATTGATTTAAATATTGAATCGAATAATCGATCGATGATTAGACTGTCGATCGGACAGT
TGACACGACACACGTAACGATCGATGATCGAAGACAGGATTCCGATCGGTTGAGTTATTA
TTACGTAAGGCGGTCGGAGCCGCGACGGAGCCGCGAGCGCGCGTCGTAGTCGCGACACAC
GACTGCAGTGCGATCCTTTGGACCGGACCCCACCGGCACTGCGCGCATCTGAGGCTCACT
CCTTAGCGCGG
(6611 bp)

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