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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
961 A_TrvaMG_comp1168906_c0_seq1
330bp
PREDICTED:_uncharacterized_protein_LOC106137125_[Amyelois_transitella]
FPKM:1.04 TPM:0.88
962 A_TrvaMG_comp11689_c0_seq1
213bp
PREDICTED:_probable_CCR4-associated_factor_1_homolog_11_[Phoenix_dactylifera]
FPKM:0.50 TPM:0.42
963 A_TrvaMG_comp11689_c1_seq1
226bp
olfactory_receptor_[Bombyx_mori]
FPKM:4.20 TPM:3.53
964 A_TrvaMG_comp11690_c0_seq1
1449bp
PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0022008 P neurogenesis
GO:0042274 P ribosomal small subunit biogenesis
GO:0044822 F RNA binding
FPKM:2.75 TPM:2.32
965 A_TrvaMG_comp11691_c0_seq1
1836bp
PREDICTED:_uncharacterized_protein_LOC105842887,_partial_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0006457 P protein folding
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042995 C cell projection
FPKM:2.39 TPM:2.01
966 A_TrvaMG_comp1169286_c0_seq1
208bp
PREDICTED:_uncharacterized_protein_LOC101744346_[Bombyx_mori]
FPKM:1.09 TPM:0.92
967 A_TrvaMG_comp11693_c0_seq1
538bp
FPKM:1.43 TPM:1.21
968 A_TrvaMG_comp1169538_c0_seq1
333bp
FPKM:0.85 TPM:0.72
969 A_TrvaMG_comp1169542_c0_seq1
236bp
hypothetical_protein_[Thalassotalea_sp._ND16A]
FPKM:0.74 TPM:0.62
970 A_TrvaMG_comp11695_c0_seq1
1186bp
FPKM:2.54 TPM:2.14
971 A_TrvaMG_comp11695_c1_seq1
792bp
FPKM:2.10 TPM:1.77
972 A_TrvaMG_comp11696_c0_seq1
712bp
PREDICTED:_DNA_cytosine-5_methyltransferase_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000792 C heterochromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003723 F RNA binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005721 C pericentric heterochromatin
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007265 P Ras protein signal transduction
GO:0007420 P brain development
GO:0007568 P aging
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008327 F methyl-CpG binding
GO:0009008 F DNA-methyltransferase activity
GO:0009408 P response to heat
GO:0009636 P response to toxic substance
GO:0010033 P response to organic substance
GO:0010212 P response to ionizing radiation
GO:0010216 P maintenance of DNA methylation
GO:0010288 P response to lead ion
GO:0010424 P DNA methylation on cytosine within a CG sequence
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0014823 P response to activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0019904 F protein domain specific binding
GO:0030182 P neuron differentiation
GO:0030331 F estrogen receptor binding
GO:0031000 P response to caffeine
GO:0031667 P response to nutrient levels
GO:0032259 P methylation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0032776 P DNA methylation on cytosine
GO:0033189 P response to vitamin A
GO:0033574 P response to testosterone
GO:0036120 P cellular response to platelet-derived growth factor stimulus
GO:0036276 P response to antidepressant
GO:0042127 P regulation of cell population proliferation
GO:0042493 P response to xenobiotic stimulus
GO:0042826 F histone deacetylase binding
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044026 P DNA hypermethylation
GO:0045322 F unmethylated CpG binding
GO:0045471 P response to ethanol
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046498 P S-adenosylhomocysteine metabolic process
GO:0046499 P S-adenosylmethioninamine metabolic process
GO:0046500 P S-adenosylmethionine metabolic process
GO:0046872 F metal ion binding
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0051573 P negative regulation of histone H3-K9 methylation
GO:0051718 F DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates
GO:0071230 P cellular response to amino acid stimulus
GO:0071284 P cellular response to lead ion
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:0090116 P C-5 methylation of cytosine
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1990090 P cellular response to nerve growth factor stimulus
GO:1990841 F promoter-specific chromatin binding
FPKM:2.24 TPM:1.89
973 A_TrvaMG_comp11696_c1_seq1
941bp
PREDICTED:_DNA_cytosine-5_methyltransferase_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0090116 P C-5 methylation of cytosine
FPKM:2.17 TPM:1.83
974 A_TrvaMG_comp1169772_c0_seq1
286bp
GNAT_family_acetyltransferase_[Bacillus_sp._NSP9.1]
FPKM:0.70 TPM:0.59
975 A_TrvaMG_comp1169797_c0_seq1
230bp
FPKM:1.20 TPM:1.01
976 A_TrvaMG_comp11697_c0_seq1
872bp
PREDICTED:_nuclear_pore_complex_protein_Nup153-like_[Bombyx_mori]
FPKM:2.85 TPM:2.40
977 A_TrvaMG_comp1169875_c0_seq1
218bp
hypothetical_protein_VP01_4625g1,_partial_[Puccinia_sorghi]
FPKM:0.94 TPM:0.79
978 A_TrvaMG_comp1169898_c0_seq1
201bp
FPKM:1.85 TPM:1.55
979 A_TrvaMG_comp11699_c0_seq1
1306bp
PREDICTED:_protein_groucho-like_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
FPKM:3.02 TPM:2.54
980 A_TrvaMG_comp1170058_c0_seq1
271bp
FPKM:1.05 TPM:0.88
981 A_TrvaMG_comp1170076_c0_seq1
232bp
FPKM:1.56 TPM:1.31
982 A_TrvaMG_comp11700_c0_seq1
622bp
hypothetical_protein_PV08_11744_[Exophiala_spinifera]
FPKM:2.41 TPM:2.03
983 A_TrvaMG_comp11701_c0_seq1
833bp
FPKM:2.88 TPM:2.42
984 A_TrvaMG_comp11702_c0_seq1
855bp
PREDICTED:_uncharacterized_protein_LOC106709669_[Papilio_machaon]
FPKM:2.35 TPM:1.98
985 A_TrvaMG_comp1170360_c0_seq1
216bp
FPKM:0.96 TPM:0.81
986 A_TrvaMG_comp1170375_c0_seq1
234bp
PREDICTED:_beta-1,4-N-acetylgalactosaminyltransferase_bre-4-like_isoform_X1_[Bombyx_mori]
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
FPKM:1.14 TPM:0.96
987 A_TrvaMG_comp11703_c0_seq1
204bp
hypothetical_protein_KGM_02614_[Danaus_plexippus]
FPKM:4.67 TPM:3.93
988 A_TrvaMG_comp1170474_c0_seq1
220bp
PREDICTED:_uncharacterized_protein_LOC105388891_[Plutella_xylostella]
FPKM:1.82 TPM:1.53
989 A_TrvaMG_comp1170482_c0_seq1
215bp
PREDICTED:_sorting_nexin-25-like,_partial_[Papilio_machaon]
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
FPKM:1.47 TPM:1.24
990 A_TrvaMG_comp11706_c0_seq1
1234bp
PREDICTED:_inositol_polyphosphate_1-phosphatase_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0004441 F inositol-1,4-bisphosphate 1-phosphatase activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0016787 F hydrolase activity
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046855 P inositol phosphate dephosphorylation
GO:0046872 F metal ion binding
FPKM:2.74 TPM:2.31
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