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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
931 A_TrvaMG_comp11666_c0_seq1
299bp
FPKM:4.65 TPM:3.91
932 A_TrvaMG_comp11667_c0_seq1
2635bp
PREDICTED:_LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
FPKM:2.57 TPM:2.16
933 A_TrvaMG_comp11668_c0_seq1
1151bp
FPKM:3.18 TPM:2.68
934 A_TrvaMG_comp11669_c0_seq1
557bp
PREDICTED:_U2_small_nuclear_ribonucleoprotein_auxiliary_factor_35_kDa_subunit-related_protein_2_isoform_X1_[Amyelois_transitella]
FPKM:3.49 TPM:2.93
935 A_TrvaMG_comp116718_c0_seq1
274bp
FPKM:7.65 TPM:6.44
936 A_TrvaMG_comp11671_c0_seq1
211bp
beta-tubulin,_partial_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
FPKM:1.56 TPM:1.31
937 A_TrvaMG_comp1167234_c0_seq1
211bp
FPKM:1.04 TPM:0.88
938 A_TrvaMG_comp1167297_c0_seq1
203bp
membrane_protein_[Mesonia_mobilis]
FPKM:1.19 TPM:1.00
939 A_TrvaMG_comp11672_c0_seq1
216bp
hypothetical_protein_ACD_80C00115G0002_[uncultured_bacterium_(gcode_4)]
FPKM:1.45 TPM:1.22
940 A_TrvaMG_comp11673_c0_seq1
221bp
FPKM:4.94 TPM:4.16
941 A_TrvaMG_comp1167429_c0_seq1
242bp
FPKM:1.39 TPM:1.17
942 A_TrvaMG_comp1167468_c0_seq1
212bp
hypothetical_protein_LS48_09820_[Vitellibacter_sp._D-24]
FPKM:1.03 TPM:0.86
943 A_TrvaMG_comp11674_c0_seq1
802bp
FPKM:3.58 TPM:3.01
944 A_TrvaMG_comp1167518_c0_seq1
218bp
FPKM:1.41 TPM:1.18
945 A_TrvaMG_comp1167596_c0_seq1
224bp
thymidylate_synthase_[Enterocytozoon_bieneusi_H348]
FPKM:1.29 TPM:1.09
946 A_TrvaMG_comp11675_c0_seq1
316bp
PREDICTED:_testis-expressed_sequence_9_protein-like_[Bombyx_mori]
FPKM:2.08 TPM:1.75
947 A_TrvaMG_comp1167721_c0_seq1
373bp
FPKM:0.84 TPM:0.71
948 A_TrvaMG_comp11677_c0_seq1
608bp
FPKM:3.83 TPM:3.23
949 A_TrvaMG_comp11678_c0_seq1
317bp
FPKM:2.07 TPM:1.74
950 A_TrvaMG_comp11679_c0_seq1
1948bp
PREDICTED:_golgin_subfamily_A_member_6-like_protein_22_isoform_X2_[Bombyx_mori]
FPKM:1.94 TPM:1.63
951 A_TrvaMG_comp1168026_c0_seq1
247bp
PREDICTED:_MAGUK_p55_subfamily_member_7_[Bombyx_mori]
GO:0004385 F guanylate kinase activity
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0030165 F PDZ domain binding
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
FPKM:0.98 TPM:0.83
952 A_TrvaMG_comp1168082_c0_seq1
231bp
FPKM:0.79 TPM:0.66
953 A_TrvaMG_comp11680_c0_seq1
216bp
integrase_[Synechococcus_sp._PCC_7335]
FPKM:4.34 TPM:3.66
954 A_TrvaMG_comp11681_c0_seq1
581bp
FPKM:2.07 TPM:1.75
955 A_TrvaMG_comp11682_c0_seq1
922bp
PREDICTED:_protein_lethal(2)k10201-like_[Plutella_xylostella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.46 TPM:1.23
956 A_TrvaMG_comp11682_c0_seq2
895bp
PREDICTED:_protein_lethal(2)k10201-like_[Plutella_xylostella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.08 TPM:0.91
957 A_TrvaMG_comp1168368_c0_seq1
223bp
FPKM:1.31 TPM:1.10
958 A_TrvaMG_comp11684_c0_seq1
214bp
type_IV_pilus_biogenesis_complex_membrane_subunit_[Halalkalicoccus_jeotgali]
FPKM:0.99 TPM:0.84
959 A_TrvaMG_comp11687_c0_seq1
1519bp
PREDICTED:_ubiquitin-like_modifier-activating_enzyme_ATG7_[Amyelois_transitella]
GO:0000407 C phagophore assembly site
GO:0004839 F ubiquitin activating enzyme activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006464 P cellular protein modification process
GO:0006497 P protein lipidation
GO:0006501 P C-terminal protein lipidation
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008134 F transcription factor binding
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0009267 P cellular response to starvation
GO:0010508 P positive regulation of autophagy
GO:0015031 P protein transport
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016567 P protein ubiquitination
GO:0019778 F Atg12 activating enzyme activity
GO:0019779 F Atg8 activating enzyme activity
GO:0031401 P positive regulation of protein modification process
GO:0034727 P piecemeal microautophagy of the nucleus
GO:0039521 P suppression by virus of host autophagy
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0044805 P late nucleophagy
GO:0045732 P positive regulation of protein catabolic process
GO:0051607 P defense response to virus
GO:0061025 P membrane fusion
GO:0071455 P cellular response to hyperoxia
GO:1903146 P regulation of autophagy of mitochondrion
FPKM:2.21 TPM:1.86
960 A_TrvaMG_comp1168860_c0_seq1
204bp
PREDICTED:_zinc_finger_protein_Elbow_[Plutella_xylostella]
FPKM:1.17 TPM:0.98
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