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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

571

1085bp

PREDICTED:_uncharacterized_protein_LOC101741494_[Bombyx_mori]

GO:0004252	F	serine-type endopeptidase activity
GO:0005044	F	scavenger receptor activity
GO:0005576	C	extracellular region
GO:0005886	C	plasma membrane
GO:0006508	P	proteolysis
GO:0006898	P	receptor-mediated endocytosis
GO:0008233	F	peptidase activity
GO:0008236	F	serine-type peptidase activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016540	P	protein autoprocessing
GO:0016787	F	hydrolase activity
GO:0046598	P	positive regulation of viral entry into host cell
GO:0070062	C	extracellular exosome

FPKM:0.30 TPM:0.25

572

1429bp

PREDICTED:_ras-related_protein_Rab-9A_[Amyelois_transitella]

GO:0000139	C	Golgi membrane
GO:0000166	F	nucleotide binding
GO:0003924	F	GTPase activity
GO:0005525	F	GTP binding
GO:0005622	C	intracellular anatomical structure
GO:0005764	C	lysosome
GO:0005768	C	endosome
GO:0005770	C	late endosome
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0005794	C	Golgi apparatus
GO:0005829	C	cytosol
GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0006913	P	nucleocytoplasmic transport
GO:0007165	P	signal transduction
GO:0007264	P	small GTPase mediated signal transduction
GO:0008152	P	metabolic process
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0019003	F	GDP binding
GO:0030670	C	phagocytic vesicle membrane
GO:0031410	C	cytoplasmic vesicle
GO:0032880	P	regulation of protein localization
GO:0042147	P	retrograde transport, endosome to Golgi
GO:0045335	C	phagocytic vesicle
GO:0045921	P	positive regulation of exocytosis
GO:0052405	P	negative regulation by host of symbiont catalytic activity
GO:0070062	C	extracellular exosome

FPKM:1.77 TPM:1.49

573

747bp

PREDICTED:_UPF0415_protein_C7orf25_homolog_[Plutella_xylostella]

FPKM:1.90 TPM:1.60

574

490bp

PREDICTED:_UPF0415_protein_C7orf25_homolog_[Amyelois_transitella]

FPKM:2.36 TPM:1.99

575

239bp

QacE_family_quaternary_ammonium_compound_efflux_SMR_transporter_[Alistipes_shahii]

FPKM:3.58 TPM:3.02

576

231bp

FPKM:0.79 TPM:0.66

577

258bp

FPKM:4.71 TPM:3.96

578

1131bp

PREDICTED:_alkylated_DNA_repair_protein_alkB_homolog_1_isoform_X2_[Bombyx_mori]

GO:0001701	P	in utero embryonic development
GO:0001764	P	neuron migration
GO:0001890	P	placenta development
GO:0003824	F	catalytic activity
GO:0003906	F	DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005719	C	euchromatin
GO:0005739	C	mitochondrion
GO:0006281	P	DNA repair
GO:0006307	P	DNA dealkylation involved in DNA repair
GO:0006974	P	cellular response to DNA damage stimulus
GO:0008152	P	metabolic process
GO:0008198	F	ferrous iron binding
GO:0010468	P	regulation of gene expression
GO:0016491	F	oxidoreductase activity
GO:0016829	F	lyase activity
GO:0030154	P	cell differentiation
GO:0031175	P	neuron projection development
GO:0042056	F	chemoattractant activity
GO:0042245	P	RNA repair
GO:0043524	P	negative regulation of neuron apoptotic process
GO:0046872	F	metal ion binding
GO:0048589	P	developmental growth
GO:0050918	P	positive chemotaxis
GO:0051213	F	dioxygenase activity
GO:0055114	P	obsolete oxidation-reduction process
GO:0070579	F	methylcytosine dioxygenase activity
GO:0070989	P	oxidative demethylation
GO:0080111	P	DNA demethylation