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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
541 A_TrvaMG_comp11321_c0_seq1
443bp
PREDICTED:_solute_carrier_family_15_member_2-like_isoform_X8_[Monodelphis_domestica]
FPKM:2.01 TPM:1.69
542 A_TrvaMG_comp11323_c0_seq1
235bp
Fanconi_anemia,_complementation_group_D2_[Bombyx_mori]
FPKM:4.88 TPM:4.11
543 A_TrvaMG_comp11324_c0_seq1
293bp
FPKM:1.32 TPM:1.11
544 A_TrvaMG_comp11325_c0_seq1
529bp
FPKM:2.85 TPM:2.40
545 A_TrvaMG_comp11326_c0_seq1
205bp
FPKM:4.59 TPM:3.87
546 A_TrvaMG_comp11327_c0_seq1
454bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
FPKM:2.44 TPM:2.06
547 A_TrvaMG_comp11328_c0_seq1
806bp
FPKM:2.01 TPM:1.69
548 A_TrvaMG_comp1133009_c0_seq1
256bp
hypothetical_protein_KGM_13821_[Danaus_plexippus]
FPKM:1.20 TPM:1.01
549 A_TrvaMG_comp11330_c0_seq1
550bp
FPKM:1.54 TPM:1.30
550 A_TrvaMG_comp11330_c1_seq1
231bp
FPKM:2.76 TPM:2.32
551 A_TrvaMG_comp1133188_c0_seq1
274bp
FPKM:1.02 TPM:0.86
552 A_TrvaMG_comp11331_c0_seq1
1439bp
PREDICTED:_poly(A)_RNA_polymerase_gld-2_homolog_A-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001556 P oocyte maturation
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003723 F RNA binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0007017 P microtubule-based process
GO:0007052 P mitotic spindle organization
GO:0007056 P spindle assembly involved in female meiosis
GO:0007343 P egg activation
GO:0007344 P pronuclear fusion
GO:0008298 P intracellular mRNA localization
GO:0016740 F transferase activity
GO:0035044 P sperm aster formation
GO:0035046 P pronuclear migration
GO:0043631 P RNA polyadenylation
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
FPKM:2.16 TPM:1.82
553 A_TrvaMG_comp11332_c0_seq1
595bp
FPKM:1.73 TPM:1.46
554 A_TrvaMG_comp11332_c1_seq1
287bp
hypothetical_protein_[Pseudobacteroides_cellulosolvens]
FPKM:0.92 TPM:0.78
555 A_TrvaMG_comp11333_c0_seq1
325bp
guanine_nucleotide-binding_protein_beta_subunit-like_protein_[Enterocytozoon_bieneusi_H348]
FPKM:1.07 TPM:0.90
556 A_TrvaMG_comp11333_c0_seq2
611bp
guanine_nucleotide-binding_protein_beta_subunit-like_protein_[Enterocytozoon_bieneusi_H348]
FPKM:1.14 TPM:0.96
557 A_TrvaMG_comp113355_c0_seq1
277bp
FPKM:5.98 TPM:5.03
558 A_TrvaMG_comp11335_c0_seq1
330bp
PREDICTED:_probable_glutamate--tRNA_ligase,_mitochondrial_[Papilio_machaon]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
FPKM:3.83 TPM:3.22
559 A_TrvaMG_comp11336_c0_seq1
434bp
PREDICTED:_LOW_QUALITY_PROTEIN:_23_kDa_integral_membrane_protein-like_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005576 C extracellular region
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007160 P cell-matrix adhesion
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0031226 C intrinsic component of plasma membrane
GO:0031902 C late endosome membrane
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0048757 P pigment granule maturation
GO:0070062 C extracellular exosome
GO:0097487 C multivesicular body, internal vesicle
GO:1900746 P regulation of vascular endothelial growth factor signaling pathway
GO:2001046 P positive regulation of integrin-mediated signaling pathway
FPKM:1.96 TPM:1.65
560 A_TrvaMG_comp11337_c0_seq1
666bp
FPKM:1.43 TPM:1.20
561 A_TrvaMG_comp11339_c0_seq1
224bp
hypothetical_protein_RR48_05192_[Papilio_machaon]
FPKM:1.72 TPM:1.45
562 A_TrvaMG_comp11340_c0_seq1
683bp
FPKM:2.02 TPM:1.70
563 A_TrvaMG_comp11341_c0_seq1
317bp
hypothetical_protein_[Streptomyces_leeuwenhoekii]
FPKM:2.63 TPM:2.21
564 A_TrvaMG_comp11342_c0_seq1
461bp
ribosomal_protein_L20A/L18A_[Enterocytozoon_bieneusi_H348]
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:2.49 TPM:2.09
565 A_TrvaMG_comp11343_c0_seq1
617bp
PREDICTED:_DNA_topoisomerase_2-binding_protein_1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0000910 P cytokinesis
GO:0004871 F obsolete signal transducer activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0007399 P nervous system development
GO:0015031 P protein transport
GO:0017048 F small GTPase binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030496 C midbody
GO:0032147 P activation of protein kinase activity
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042307 P positive regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043547 P positive regulation of GTPase activity
GO:0045666 P positive regulation of neuron differentiation
GO:0045859 P regulation of protein kinase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0051260 P protein homooligomerization
GO:0051301 P cell division
GO:0051988 P regulation of attachment of spindle microtubules to kinetochore
GO:0070301 P cellular response to hydrogen peroxide
GO:0070830 P bicellular tight junction assembly
GO:0071277 P cellular response to calcium ion
GO:0071479 P cellular response to ionizing radiation
GO:0072686 C mitotic spindle
GO:0090630 P activation of GTPase activity
GO:0097149 C centralspindlin complex
FPKM:2.04 TPM:1.72
566 A_TrvaMG_comp11343_c1_seq1
566bp
PREDICTED:_DNA_topoisomerase_2-binding_protein_1_[Bombyx_mori]
FPKM:1.70 TPM:1.43
567 A_TrvaMG_comp113449_c0_seq1
282bp
FPKM:3.11 TPM:2.62
568 A_TrvaMG_comp11344_c0_seq1
1371bp
PREDICTED:_UDP-sugar_transporter_UST74c_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0001745 P compound eye morphogenesis
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005458 F GDP-mannose transmembrane transporter activity
GO:0005459 F UDP-galactose transmembrane transporter activity
GO:0005460 F UDP-glucose transmembrane transporter activity
GO:0005461 F UDP-glucuronic acid transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006810 P transport
GO:0007220 P Notch receptor processing
GO:0007367 P segment polarity determination
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008643 P carbohydrate transport
GO:0009880 P embryonic pattern specification
GO:0015165 F pyrimidine nucleotide-sugar transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015781 P pyrimidine nucleotide-sugar transmembrane transport
GO:0015785 P UDP-galactose transmembrane transport
GO:0015786 P UDP-glucose transmembrane transport
GO:0015787 P UDP-glucuronic acid transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0072334 P UDP-galactose transmembrane transport
GO:0090481 P pyrimidine nucleotide-sugar transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
FPKM:1.80 TPM:1.52
569 A_TrvaMG_comp113459_c0_seq1
1240bp
PREDICTED:_transcription_factor_GAGA-like_[Papilio_xuthus]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
FPKM:7.08 TPM:5.96
570 A_TrvaMG_comp11345_c0_seq1
1377bp
PREDICTED:_uncharacterized_protein_LOC101741494_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005044 F scavenger receptor activity
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0046598 P positive regulation of viral entry into host cell
GO:0070062 C extracellular exosome
FPKM:1.37 TPM:1.15
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