SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11346_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ras-related_protein_Rab-9A_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032880 P regulation of protein localization
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045335 C phagocytic vesicle
GO:0045921 P positive regulation of exocytosis
GO:0052405 P negative regulation by host of symbiont catalytic activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.77 TPM:1.49
ORF EntryO_TrvaMG153_complete:A_TrvaMG_comp11346_c0_seq1
Sequence
(Nucleotide)
CAAAGTTACAGATCTACCCTGTATCTATTAAATTATTAATCTGTAAACTATGCAGGCTAA
CTCTATTTCTTTATTAGCTGTTTAAGAGGACGGGATAATATCTAAGTACACTTAAAAGAT
ATTAAGTCAAAATATAACTGATTTCGTTATACACTCGCCAGTTTATTATAATTATTATGA
ATTTAATATCTTAAAGAAATATCGATTAAATGCATTAATAACCAATATTGTTCAAAAAAC
TTACGACTTATTTATTAGATTCTCGACCTTTTCTCTAAGAATTAGAGTACATACTACTCG
TTTCAAGTGTCAATATTACACTAAAATTAGCAAGATACAACAGATATTATCATTTGCAAA
TATAATTATGAATATACATGAATCAAACGTTATTTTATAAATATCTGCAAATACTAACAT
TTTATCTTACTTGGCTTTACATCCGGTCATCTTAGCCTAAGTTCCGGGACGTCATTTTTG
ACAGTTGACAGGTATCAAAACCATCATACGTCAGTGATACGCGAGCAGCAAGTCGCGCGG
AAACCGGATGCGCTTCCGTTTCCGTGTAGGGTGACAGCGTCGGGATGCTGAAACATACCT
AGTTCTTTTTCGGCTCTTTGTTCTAAGTCTACCCATCTCTGCACAGCCATAGAGAATGCT
TCAATGACATTATTGTCGTTTTTGGCAGAGGTCTCTATGTACGTAGATATCTTGTTGTCG
TCGCACCACTGTTTCAACTGATCGTGACTAACTTCTCTGTCTTTGCTGGGCACGTCCGAC
TTATTTCCTACCACCATAAATGGGTATCGATCTATGCCGTTTTTGACCCCGGCGTAATGC
AGGAATTCGTTAAGCCACATCTTGATGTTGGTAAATGAACTCCTGTCATCTATTGCGTAT
GCCAGTATGCATATATCCGATCCTCTGTAGAACGGAGTCCTTAGAGATTTGAACCTTTCC
TGTCCTGCTGTGTCCCATACCTGAAGAGTGTATGGTTTTCCATTAACTTCAATAGTCTTG
TTCATAAACTCCACGCCTATGGTATGAAAGCTATGGTCATCGAAGTGGTTCGAAATGAAC
CTGCTCATCAAACAGGATTTCCCGACTCCACCATCGCCAAGAATCACTATCTTCAGCAAA
GTGTTCTTATTTTGATTTCTACGATCATTTTCATCCATTCTTCTTTGTCAATCGCACATT
ATCTAATTATAAATTATTTGAGAGCAGCTGCTTCCAATTTCAGCTCAAAACGCGACTGTT
TGATTAATGACTCACTTTTTAATTGGTTTCAAAGAGATTCTTCATTAATTTGGTCTACTG
TTTGTGATGTCCTTGTGTTTTGAAGTTTTACTGTGCGAGTTACTTTGTTGAATGAAGTTT
AAAATCTCATCGTTTTGTATTTGACAATAATAATAATTGTGATGTATTG
(1429 bp)

- SilkBase 1999-2023 -