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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
601 A_TrvaMG_comp11370_c0_seq1
393bp
hypothetical_protein_RR48_01672_[Papilio_machaon]
FPKM:2.43 TPM:2.05
602 A_TrvaMG_comp113727_c0_seq1
1414bp
PREDICTED:_cytoplasmic_tRNA_2-thiolation_protein_1_[Papilio_polytes]
GO:0000049 F tRNA binding
GO:0002098 P tRNA wobble uridine modification
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032447 P protein urmylation
GO:0034227 P tRNA thio-modification
FPKM:6.49 TPM:5.46
603 A_TrvaMG_comp11372_c0_seq1
586bp
PREDICTED:_uncharacterized_protein_LOC101747197_[Bombyx_mori]
FPKM:1.20 TPM:1.01
604 A_TrvaMG_comp11373_c0_seq1
201bp
hypothetical_protein_SACIG1750_2966,_partial_[Staphylococcus_aureus_subsp._aureus_CIG1750]
FPKM:2.46 TPM:2.07
605 A_TrvaMG_comp11374_c0_seq1
319bp
PREDICTED:_biorientation_of_chromosomes_in_cell_division_protein_1-like_1_isoform_X2_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
FPKM:0.55 TPM:0.47
606 A_TrvaMG_comp11374_c0_seq2
509bp
PREDICTED:_biorientation_of_chromosomes_in_cell_division_protein_1-like_1_isoform_X2_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
FPKM:1.38 TPM:1.16
607 A_TrvaMG_comp11375_c0_seq1
526bp
FPKM:2.55 TPM:2.14
608 A_TrvaMG_comp11377_c0_seq1
455bp
hypothetical_protein_[Bacillus_smithii]
FPKM:0.91 TPM:0.77
609 A_TrvaMG_comp11378_c0_seq1
921bp
PREDICTED:_LOW_QUALITY_PROTEIN:_WD_repeat_domain-containing_protein_83_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071013 C catalytic step 2 spliceosome
FPKM:1.95 TPM:1.64
610 A_TrvaMG_comp11379_c0_seq1
462bp
polyhomeotic_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0021954 P central nervous system neuron development
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035075 P response to ecdysone
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0044547 F DNA topoisomerase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
FPKM:2.58 TPM:2.17
611 A_TrvaMG_comp1137_c0_seq1
318bp
PREDICTED:_microtubule-associated_serine/threonine-protein_kinase_4_[Eucalyptus_grandis]
FPKM:0.75 TPM:0.63
612 A_TrvaMG_comp11382_c0_seq1
479bp
FPKM:2.07 TPM:1.74
613 A_TrvaMG_comp11383_c0_seq1
346bp
FPKM:1.75 TPM:1.48
614 A_TrvaMG_comp11384_c0_seq1
606bp
PREDICTED:_probable_palmitoyltransferase_ZDHHC24_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
FPKM:2.63 TPM:2.22
615 A_TrvaMG_comp11385_c0_seq1
1246bp
PREDICTED:_CDP-diacylglycerol--glycerol-3-phosphate_3-phosphatidyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008150 P biological_process
GO:0008444 F CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0008654 P phospholipid biosynthetic process
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0032049 P cardiolipin biosynthetic process
GO:0046339 P diacylglycerol metabolic process
FPKM:1.93 TPM:1.62
616 A_TrvaMG_comp11387_c0_seq1
262bp
FPKM:2.83 TPM:2.38
617 A_TrvaMG_comp11387_c1_seq1
255bp
3-deoxy-D-manno-octulosonic-acid_transferase_[Prevotella_sp._CAG:5226]
FPKM:2.72 TPM:2.29
618 A_TrvaMG_comp11388_c0_seq1
883bp
FPKM:2.38 TPM:2.00
619 A_TrvaMG_comp11389_c0_seq1
351bp
FPKM:2.17 TPM:1.83
620 A_TrvaMG_comp11390_c0_seq1
275bp
hypothetical_protein_ASPNIDRAFT_46197_[Aspergillus_niger_ATCC_1015]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.53 TPM:2.13
621 A_TrvaMG_comp11391_c0_seq1
1704bp
FPKM:1.51 TPM:1.28
622 A_TrvaMG_comp11392_c0_seq1
246bp
hypothetical_protein_DAPPUDRAFT_99355_[Daphnia_pulex]
FPKM:3.32 TPM:2.79
623 A_TrvaMG_comp11393_c0_seq1
491bp
hypothetical_protein_AWW68_13215_[Roseivirga_spongicola]
FPKM:1.90 TPM:1.60
624 A_TrvaMG_comp11393_c1_seq1
805bp
FPKM:1.97 TPM:1.66
625 A_TrvaMG_comp113940_c0_seq1
1359bp
PREDICTED:_THAP_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
FPKM:5.54 TPM:4.67
626 A_TrvaMG_comp11394_c0_seq1
382bp
FPKM:2.95 TPM:2.48
627 A_TrvaMG_comp11395_c0_seq1
1075bp
regulatory-associated_protein_of_TOR_[Bombyx_mori]
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0008361 P regulation of cell size
GO:0016049 P cell growth
GO:0019901 F protein kinase binding
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0032008 P positive regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0046676 P negative regulation of insulin secretion
GO:0071230 P cellular response to amino acid stimulus
GO:0071889 F 14-3-3 protein binding
GO:0071902 P positive regulation of protein serine/threonine kinase activity
FPKM:2.32 TPM:1.95
628 A_TrvaMG_comp11396_c0_seq1
723bp
PREDICTED:_LOW_QUALITY_PROTEIN:_treacle_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030155 P regulation of cell adhesion
GO:0035507 P regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:2000772 P regulation of cellular senescence
FPKM:2.47 TPM:2.08
629 A_TrvaMG_comp11396_c1_seq1
1118bp
PREDICTED:_LOW_QUALITY_PROTEIN:_treacle_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030155 P regulation of cell adhesion
GO:0035507 P regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0042127 P regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000772 P regulation of cellular senescence
FPKM:1.80 TPM:1.52
630 A_TrvaMG_comp11397_c0_seq1
473bp
FPKM:2.30 TPM:1.93
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