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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_TrvaMG_comp11158_c0_seq2
390bp
FPKM:2.46 TPM:2.07
362 A_TrvaMG_comp11159_c0_seq1
979bp
PREDICTED:_mucin-5AC-like_[Amyelois_transitella]
FPKM:2.14 TPM:1.81
363 A_TrvaMG_comp11160_c0_seq1
1458bp
PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Bombyx_mori]
FPKM:2.90 TPM:2.44
364 A_TrvaMG_comp11160_c0_seq2
1493bp
PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
365 A_TrvaMG_comp11161_c0_seq1
268bp
FPKM:4.03 TPM:3.39
366 A_TrvaMG_comp11163_c0_seq1
1717bp
PREDICTED:_equilibrative_nucleoside_transporter_3_[Papilio_machaon]
GO:0005337 F nucleoside transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007595 P lactation
GO:0015858 P nucleoside transport
GO:0015862 P uridine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0030431 P sleep
GO:0060079 P excitatory postsynaptic potential
GO:0071333 P cellular response to glucose stimulus
GO:0071456 P cellular response to hypoxia
GO:0098794 C postsynapse
GO:1901642 P nucleoside transmembrane transport
FPKM:2.15 TPM:1.81
367 A_TrvaMG_comp11165_c0_seq1
286bp
replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:1.62 TPM:1.37
368 A_TrvaMG_comp11165_c0_seq2
920bp
replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:2.39 TPM:2.01
369 A_TrvaMG_comp11166_c0_seq1
350bp
FPKM:0.94 TPM:0.79
370 A_TrvaMG_comp11169_c0_seq1
2156bp
PREDICTED:_uncharacterized_protein_LOC106119039_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016020 C membrane
GO:0016787 F hydrolase activity
FPKM:1.83 TPM:1.54
371 A_TrvaMG_comp111718_c0_seq1
414bp
mCG144578,_partial_[Mus_musculus]
FPKM:8.47 TPM:7.13
372 A_TrvaMG_comp11171_c0_seq1
249bp
FPKM:4.18 TPM:3.52
373 A_TrvaMG_comp111720_c0_seq1
1494bp
PREDICTED:_transmembrane_protein_135-like_[Amyelois_transitella]
GO:0005777 C peroxisome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:8.49 TPM:7.14
374 A_TrvaMG_comp111729_c0_seq1
1090bp
PREDICTED:_proliferating_cell_nuclear_antigen_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0030337 F DNA polymerase processivity factor activity
FPKM:6.91 TPM:5.82
375 A_TrvaMG_comp11172_c0_seq1
1001bp
FPKM:2.16 TPM:1.82
376 A_TrvaMG_comp11173_c0_seq1
911bp
FPKM:2.42 TPM:2.04
377 A_TrvaMG_comp1117460_c0_seq1
225bp
FPKM:0.85 TPM:0.72
378 A_TrvaMG_comp1117580_c0_seq1
268bp
PREDICTED:_glycine_receptor_subunit_alpha-4-like,_partial_[Saccoglossus_kowalevskii]
FPKM:0.27 TPM:0.23
379 A_TrvaMG_comp111758_c0_seq1
718bp
PREDICTED:_peptidyl-tRNA_hydrolase_2,_mitochondrial-like_[Papilio_xuthus]
GO:0004045 F aminoacyl-tRNA hydrolase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0008152 P metabolic process
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:2000210 P positive regulation of anoikis
GO:2000811 P negative regulation of anoikis
FPKM:9.52 TPM:8.02
380 A_TrvaMG_comp1117667_c0_seq1
263bp
FPKM:1.12 TPM:0.95
381 A_TrvaMG_comp11176_c0_seq1
258bp
FPKM:3.53 TPM:2.97
382 A_TrvaMG_comp111774_c0_seq1
590bp
FPKM:5.46 TPM:4.60
383 A_TrvaMG_comp111789_c0_seq1
377bp
MBF2_[Samia_cynthia]
FPKM:13.58 TPM:11.43
384 A_TrvaMG_comp111801_c0_seq1
2760bp
hypothetical_protein_KGM_06054_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0035019 P somatic stem cell population maintenance
GO:0036459 F thiol-dependent deubiquitinase
FPKM:7.17 TPM:6.04
385 A_TrvaMG_comp11180_c0_seq1
598bp
FPKM:2.61 TPM:2.20
386 A_TrvaMG_comp11181_c0_seq1
414bp
FPKM:2.59 TPM:2.18
387 A_TrvaMG_comp11183_c0_seq1
1639bp
PREDICTED:_kettin_protein_isoform_X1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
FPKM:1.62 TPM:1.37
388 A_TrvaMG_comp11184_c0_seq1
608bp
PREDICTED:_titin-like_[Bombyx_mori]
FPKM:0.43 TPM:0.36
389 A_TrvaMG_comp11184_c0_seq2
1468bp
PREDICTED:_yemanuclein-alpha_isoform_X3_[Papilio_xuthus]
FPKM:1.73 TPM:1.46
390 A_TrvaMG_comp11185_c0_seq1
1102bp
putative_ubiquitin-protein_ligase_[Danaus_plexippus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
FPKM:2.41 TPM:2.03
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