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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp111801_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_06054_[Danaus_plexippus]
Ontology
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0035019 P somatic stem cell population maintenance
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:7.17 TPM:6.04
ORF EntryO_TrvaMG24882_complete:A_TrvaMG_comp111801_c0_seq1
Sequence
(Nucleotide)
GTGCTTTTGTAAAAATTATGTTGTTTCGAAAACATGAAAAAGGCATTAAACGTAGTTGAA
AGTTTTCATTGATTTCGTGTTTGTTAAAAGTAATTTGTTCCAAGAATCAAAAATGATAGC
TGTGATTTGATATCGTGATATTGCAGTTTTGGAGGTAAAATGCCCGCTTCAATTTGCGAC
CCAGTAACGAGCGCATTGCGTTTATCTTTAACTCAAGACGAATCTCAGGGTTCATCTTTG
TTAGACAGTCGCTTATATTCTTCAGCCAAGAGTGTTCTCTTAACTAAAATAGAATTTGAA
GAGTCTGGAGACTATCAAAGTAATGTTCTGGATGGACTTAAATCAAAGTACGTGGTTATT
CGACCAAAGAAAACGATTCACGATTCTAAAGCTTTTAAGAAAGAAAGTGCTTGTAACAGC
CAAAATTTAGAAAACACCAAGTCTGTAGAGGATGGAATACCAAAGCCTAAAAGGGTTTTG
TTTCCACTTGAAAGAGTTCAACTTGGATGGCAGAGTGCATGGGCAGCAGGGGCTGGCATG
CAGAATGTTGGCAACACATGTTACCTGAATTCCACCCTTCAAGCTTTATTTCATGTACCT
GCTTTGGCTAATTGGATGATATCTGAATCTAGTCATGGCGATAAATGTAATCAACAAGAG
TCTTGTGTAATATGTGGAATGCGTGCTGCATTGATGGCAACACAAAAGAGTGGAGGTGCT
CCAATAAAACCTTGGCAAGTTTATTCAAAACTGCGACTTATCTGTAGACATTTGACTCCT
GGCAGACAAGAAGATGCACATGAGTTTCTGAGATATTTAGTAGAAGCAATGGAAAAATGC
TATTTATTGAGGTTCATGAATTCTGATAAATTAGATCAATACAGTAAAGAGACTACTCCA
TTAAATCAGATATTAGGTGGATATCTAAGATCAACAGTGAGATGTTTATCTTGTCAACAT
TTGTCTACTACTTATCAGCATTTCCAGGATTTATTATTAGATATAAGGAAACACTCAACA
TTAGATGAAGCTTTGGATTCATTTTTTTCTAGAGAAAGACTAGAAGATTTAGGGTATAAA
TGTGAAGCATGTAACAAAAAGGTGTCAGCTACAAAACAATTTTTTGTGGAGCGTGCCCCT
ATGGTGTTGTGTATTGCATTAAAACGATTTTCATTGGCAGGAGGGAAGCTTTCAAAACAT
GTGCAATTTAGGAAAAAAATAAGTCTGAACAAATATATTTATAATAAAACCTCACGTCAA
CAATTGTCTTATAAATTAGTAAGTTTAGTAACACATTTGGGTCCATCACAAAATTGTGGT
CACTACACTGCAATAGGTCAAGCACCAAATGGAAATTATTATCAATTTGATGACAGCTGT
GTGAGGCCACTCCCGTTGTCTGCAGTGTTAGGAACTAATGCATACATTATGTTCTTTGAA
AAAGACACAGAAGAAGCATGTTCGTCAACAGCCACAACTTCCAATGTGGTTTATGGCCCA
CAGCTTCCAGAAAATATTCTTAACAGAGAAAAAAGTCCTTTGAAACTAACATTTTATAGA
AATGATGAGAGGAAACCTATTTTACTAAATAGTGTTGGTGTGGAAAGTTCCAAACCAATT
ATTTTAAATAGTACGTTGAGTAACCCTGAAACCTCTTCTAACATTAATTCCGAACCTTGG
GTTGTTAAGCAAAATGGAGAAATAGAAAAAGTTGTGCAGAATTCTAAAGTTATGAATGGC
ATTGACAAATCTCAGAATGTAGTTGATGATAAAAAGGTGAGTTTTGTCATCAAAAGACAA
AATAATGAGGATGTACAAGTAAAGCCAAAAGTATGTAAAAGTGATTCAAATATCAAAGTA
GTTGTGAACAACACAAAACCTACGGAACAGACACCATCAACTAGTAAACTTAATTATAAA
CCATCTAAATCCCCTCTTGAGAAGTTGGAAGAGCAAATGAACAAAAGTGATGGAAGTGAA
AATGTTTTAAAAAGTGAAAGTACTAGTTCAAGATTAGTTCCTTATGACTCCGAGTCGAGT
GGTGATGAACGCGTCGGCCTCCTCGCAGAGAGAAACGGAGACGACTCAGCACACAGAATA
CCCAATAAAGAGGAAGGACGTAAACCCAAACCAAGCCGGTGTGAATCTCCACGGTCGCTT
GTTGTTACTACTAAAAGTTCCTGGACAGTATCTAGCGAGAAGAGTGGCCCTCTTCTCAGT
CCCAGTTTAAATGGCGATACTAATAAAAAATTGTTGGAGGAGCAGAGTCCTGCAACAAGC
GTGAGCAGCATGTCTCCAGCAAGCGAGCCGTGTCGCGGCGACGTCAGCCCCGGCGCCGTC
ACACGCGCGCTGCAGGCCTCCTCGCACCGCGGCTACGGCGCACCCGTGCCCGCCTGGACG
CACGCACACAGCGCGCTCTCGCGACAGGTGTTTGAGGAGAGACGTGAAGAGAGGAAAAGG
ATTGCAGATTCGACCGACGACATGGATCGTGGCCGAATAAAAAAAGTCAAAAAGTTTCAT
AATTTTAACAGGTTTAACAACCACAGAAATGGTGGTGGTTACAATCCTTTCCAGGAAAAA
CAAAATAAACTACATTGGGGAGGAGGAAATTTTAAATACAGGAATGAAAGACGTCCACAT
CATTTTAATAAACATCACAATAATAAATACAAGCGATTTAATAGCAGGTACAGTAACGGG
CACCACTACCCGCGGCACCATTGACCCGCGCTGAGTGCGGCGCGCCCGCCCCGGCCCCGC
(2760 bp)

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