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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_TrvaMG_comp110853_c0_seq1
362bp
FPKM:9.27 TPM:7.80
332 A_TrvaMG_comp110859_c0_seq1
320bp
FPKM:0.18 TPM:0.16
333 A_TrvaMG_comp1108_c0_seq1
211bp
FPKM:1.04 TPM:0.88
334 A_TrvaMG_comp110908_c0_seq1
597bp
FPKM:8.41 TPM:7.08
335 A_TrvaMG_comp1109325_c0_seq1
282bp
PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
FPKM:1.20 TPM:1.01
336 A_TrvaMG_comp110991_c0_seq1
834bp
FPKM:8.35 TPM:7.03
337 A_TrvaMG_comp111028_c0_seq1
728bp
FPKM:7.34 TPM:6.18
338 A_TrvaMG_comp111120_c0_seq1
275bp
FPKM:9.62 TPM:8.10
339 A_TrvaMG_comp111166_c0_seq1
516bp
FPKM:7.42 TPM:6.25
340 A_TrvaMG_comp111215_c0_seq1
483bp
FPKM:5.39 TPM:4.53
341 A_TrvaMG_comp11134_c0_seq1
293bp
PREDICTED:_LOW_QUALITY_PROTEIN:_sentrin-specific_protease_6_[Picoides_pubescens]
FPKM:0.66 TPM:0.56
342 A_TrvaMG_comp111366_c0_seq1
214bp
FPKM:0.00 TPM:0.00
343 A_TrvaMG_comp111407_c0_seq1
305bp
hypothetical_protein_[Methanosarcina_mazei]
FPKM:1.83 TPM:1.54
344 A_TrvaMG_comp11145_c0_seq1
1583bp
FPKM:1.77 TPM:1.49
345 A_TrvaMG_comp11146_c0_seq1
272bp
FPKM:0.26 TPM:0.22
346 A_TrvaMG_comp11148_c0_seq1
482bp
PREDICTED:_protein_cramped_[Amyelois_transitella]
FPKM:2.42 TPM:2.04
347 A_TrvaMG_comp11149_c0_seq1
764bp
PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
FPKM:2.10 TPM:1.77
348 A_TrvaMG_comp11150_c0_seq1
485bp
PREDICTED:_histone-lysine_N-methyltransferase_trithorax-like_[Bombyx_mori]
FPKM:2.58 TPM:2.18
349 A_TrvaMG_comp11150_c0_seq2
278bp
PREDICTED:_histone-lysine_N-methyltransferase_trithorax-like_[Bombyx_mori]
FPKM:2.22 TPM:1.87
350 A_TrvaMG_comp11151_c0_seq1
1305bp
death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008656 F cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0016787 F hydrolase activity
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
FPKM:1.72 TPM:1.45
351 A_TrvaMG_comp111520_c0_seq1
715bp
PREDICTED:_uncharacterized_protein_LOC106717772_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0097038 C perinuclear endoplasmic reticulum
FPKM:5.82 TPM:4.90
352 A_TrvaMG_comp11152_c0_seq1
1469bp
PREDICTED:_uncharacterized_protein_LOC106133203_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0001222 F transcription corepressor binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0035091 F phosphatidylinositol binding
GO:0042393 F histone binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070822 C Sin3-type complex
FPKM:2.04 TPM:1.72
353 A_TrvaMG_comp111532_c0_seq1
445bp
FPKM:7.67 TPM:6.45
354 A_TrvaMG_comp11153_c0_seq1
650bp
FPKM:1.97 TPM:1.66
355 A_TrvaMG_comp11154_c0_seq1
757bp
PREDICTED:_zinc_finger_protein_33A-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.28 TPM:1.92
356 A_TrvaMG_comp11155_c0_seq1
484bp
FPKM:2.87 TPM:2.42
357 A_TrvaMG_comp11156_c0_seq1
512bp
Uncharacterized_protein_C20orf26_[Papilio_machaon]
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.96 TPM:1.65
358 A_TrvaMG_comp1115747_c0_seq1
230bp
FPKM:1.20 TPM:1.01
359 A_TrvaMG_comp11157_c0_seq1
574bp
PREDICTED:_LSP-T_protein_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:3.19 TPM:2.68
360 A_TrvaMG_comp11158_c0_seq1
511bp
FPKM:0.00 TPM:0.00
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