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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
391 A_TrvaMG_comp11185_c1_seq1
367bp
PREDICTED:_ubiquitin-protein_ligase_E3B_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
FPKM:3.59 TPM:3.02
392 A_TrvaMG_comp11187_c0_seq1
727bp
hypothetical_protein_RR46_13726_[Papilio_xuthus]
FPKM:2.50 TPM:2.11
393 A_TrvaMG_comp11188_c0_seq1
492bp
FPKM:3.07 TPM:2.59
394 A_TrvaMG_comp11189_c0_seq1
624bp
PREDICTED:_uncharacterized_protein_LOC106136651_[Amyelois_transitella]
FPKM:1.82 TPM:1.53
395 A_TrvaMG_comp11190_c0_seq1
205bp
FPKM:1.72 TPM:1.45
396 A_TrvaMG_comp11191_c0_seq1
404bp
Uncharacterized_protein_OBRU01_15696_[Operophtera_brumata]
FPKM:2.08 TPM:1.75
397 A_TrvaMG_comp11194_c0_seq1
274bp
FPKM:2.81 TPM:2.36
398 A_TrvaMG_comp11195_c0_seq1
635bp
PREDICTED:_titin-like_isoform_X2_[Bombyx_mori]
FPKM:2.35 TPM:1.98
399 A_TrvaMG_comp11196_c0_seq1
358bp
FPKM:3.75 TPM:3.16
400 A_TrvaMG_comp11197_c0_seq1
508bp
FPKM:2.85 TPM:2.40
401 A_TrvaMG_comp11199_c0_seq1
879bp
FPKM:2.27 TPM:1.91
402 A_TrvaMG_comp11200_c0_seq1
956bp
PREDICTED:_uncharacterized_protein_LOC101739529_[Bombyx_mori]
FPKM:2.02 TPM:1.70
403 A_TrvaMG_comp11203_c0_seq1
280bp
FPKM:1.46 TPM:1.23
404 A_TrvaMG_comp11204_c0_seq1
857bp
PREDICTED:_LOW_QUALITY_PROTEIN:_ovochymase-2-like_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0046658 C anchored component of plasma membrane
FPKM:1.82 TPM:1.53
405 A_TrvaMG_comp11205_c0_seq1
1971bp
PREDICTED:_F-box/LRR-repeat_protein_4_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0008150 P biological_process
FPKM:1.96 TPM:1.65
406 A_TrvaMG_comp112066_c0_seq1
1579bp
FPKM:6.06 TPM:5.10
407 A_TrvaMG_comp11206_c0_seq1
412bp
PREDICTED:_ribonuclease_P_protein_subunit_p40-like_[Amyelois_transitella]
FPKM:3.20 TPM:2.69
408 A_TrvaMG_comp11206_c1_seq1
660bp
PREDICTED:_ribonuclease_P_protein_subunit_p40-like_[Amyelois_transitella]
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.87 TPM:1.57
409 A_TrvaMG_comp11207_c0_seq1
319bp
hypothetical_protein_BOTBODRAFT_35049_[Botryobasidium_botryosum_FD-172_SS1]
FPKM:2.97 TPM:2.50
410 A_TrvaMG_comp1121040_c0_seq1
272bp
FPKM:1.30 TPM:1.09
411 A_TrvaMG_comp11210_c0_seq1
867bp
PREDICTED:_uncharacterized_protein_LOC101737849_isoform_X1_[Bombyx_mori]
FPKM:0.83 TPM:0.70
412 A_TrvaMG_comp11210_c0_seq2
805bp
PREDICTED:_uncharacterized_protein_LOC101737849_isoform_X1_[Bombyx_mori]
FPKM:1.29 TPM:1.09
413 A_TrvaMG_comp11211_c0_seq1
296bp
FPKM:3.67 TPM:3.09
414 A_TrvaMG_comp11212_c0_seq1
287bp
FPKM:4.14 TPM:3.49
415 A_TrvaMG_comp11213_c0_seq1
1778bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.80 TPM:1.52
416 A_TrvaMG_comp11214_c0_seq1
539bp
Eph_receptor_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005003 F ephrin receptor activity
GO:0005004 F GPI-linked ephrin receptor activity
GO:0005005 F transmembrane-ephrin receptor activity
GO:0005524 F ATP binding
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019933 P cAMP-mediated signaling
GO:0021766 P hippocampus development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0032793 P positive regulation of CREB transcription factor activity
GO:0032956 P regulation of actin cytoskeleton organization
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0048471 C perinuclear region of cytoplasm
GO:0048666 P neuron development
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
FPKM:0.00 TPM:0.00
417 A_TrvaMG_comp11214_c0_seq2
2526bp
PREDICTED:_ephrin_type-B_receptor_1-B_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005003 F ephrin receptor activity
GO:0005004 F GPI-linked ephrin receptor activity
GO:0005005 F transmembrane-ephrin receptor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005741 C mitochondrial outer membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007628 P adult walking behavior
GO:0008045 P motor neuron axon guidance
GO:0008347 P glial cell migration
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0021957 P corticospinal tract morphogenesis
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031594 C neuromuscular junction
GO:0031901 C early endosome membrane
GO:0042731 F PH domain binding
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043087 P regulation of GTPase activity
GO:0043197 C dendritic spine
GO:0043204 C perikaryon
GO:0043507 P positive regulation of JUN kinase activity
GO:0043679 C axon terminus
GO:0044295 C axonal growth cone
GO:0044297 C cell body
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046777 P protein autophosphorylation
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0048681 P negative regulation of axon regeneration
GO:0048710 P regulation of astrocyte differentiation
GO:0050770 P regulation of axonogenesis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0061001 P regulation of dendritic spine morphogenesis
GO:0072178 P nephric duct morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
GO:0097156 P fasciculation of motor neuron axon
GO:0097161 F DH domain binding
GO:2001108 P positive regulation of Rho guanyl-nucleotide exchange factor activity
FPKM:2.03 TPM:1.71
418 A_TrvaMG_comp1121512_c0_seq1
276bp
PREDICTED:_cytochrome_b5_reductase_4_isoform_X1_[Amyelois_transitella]
FPKM:0.50 TPM:0.42
419 A_TrvaMG_comp11215_c0_seq1
853bp
PREDICTED:_histone_H1B-like_[Amyelois_transitella]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
FPKM:2.18 TPM:1.84
420 A_TrvaMG_comp11216_c0_seq1
289bp
acyltransferase_[Methanosarcina_barkeri]
FPKM:3.63 TPM:3.06
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