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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_BomoSK_comp10379_c0_seq1
1168bp
 putative_zinc_finger_BED_domain-containing_protein_1-like_protein_[Operophtera_brumata]
FPKM:2.23 TPM:2.25
752 A_BomoSK_comp10379_c0_seq2
1041bp
 putative_zinc_finger_BED_domain-containing_protein_1-like_protein_[Operophtera_brumata]
FPKM:8.89 TPM:8.94
753 A_BomoSK_comp10379_c0_seq3
1096bp
 putative_zinc_finger_BED_domain-containing_protein_1-like_protein_[Operophtera_brumata]
FPKM:9.42 TPM:9.47
754 A_BomoSK_comp10380_c0_seq1
1713bp
 ARP6_actin-related_protein_6-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006338 P chromatin remodeling
FPKM:5.45 TPM:5.48
755 A_BomoSK_comp10381_c0_seq1
529bp
 hypothetical_protein_[Theileria_annulata]
FPKM:1.93 TPM:1.95
756 A_BomoSK_comp10381_c1_seq1
797bp
FPKM:1.94 TPM:1.95
757 A_BomoSK_comp10382_c0_seq1
1235bp
FPKM:4.56 TPM:4.59
758 A_BomoSK_comp10382_c0_seq2
442bp
FPKM:3.54 TPM:3.56
759 A_BomoSK_comp103830_c0_seq1
253bp
FPKM:6.42 TPM:6.45
760 A_BomoSK_comp10384_c0_seq1
234bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Harpegnathos_saltator]
FPKM:1.05 TPM:1.05
761 A_BomoSK_comp103858_c0_seq1
401bp
 Probable_serine_protease_[Sorangium_cellulosum_So_ce56]
FPKM:5.28 TPM:5.31
762 A_BomoSK_comp10385_c0_seq1
294bp
 Transposable_element_Tcb2_transposase,_partial_[Camponotus_floridanus]
FPKM:1.04 TPM:1.05
763 A_BomoSK_comp10385_c1_seq1
465bp
 MULTISPECIES:_poly(R)-hydroxyalkanoic_acid_synthase_[Burkholderia]
FPKM:0.81 TPM:0.82
764 A_BomoSK_comp103864_c0_seq1
825bp
 PREDICTED:_SLIT-ROBO_Rho_GTPase-activating_protein_3-like_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030336 P negative regulation of cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
FPKM:3.88 TPM:3.91
765 A_BomoSK_comp103869_c0_seq1
1997bp
 integrin_beta4_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005178 F integrin binding
GO:0006954 P inflammatory response
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008305 C integrin complex
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043235 C receptor complex
GO:0070062 C extracellular exosome
FPKM:4.75 TPM:4.78
766 A_BomoSK_comp10386_c0_seq1
1457bp
FPKM:4.60 TPM:4.63
767 A_BomoSK_comp103872_c0_seq1
872bp
FPKM:3.12 TPM:3.14
768 A_BomoSK_comp10387_c0_seq1
357bp
 PREDICTED:_uncharacterized_protein_LOC105842941_[Bombyx_mori]
FPKM:0.33 TPM:0.33
769 A_BomoSK_comp103880_c0_seq1
325bp
FPKM:4.08 TPM:4.10
770 A_BomoSK_comp103897_c0_seq1
1729bp
 minichromosome_maintenance_complex_component_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
FPKM:3.35 TPM:3.37
771 A_BomoSK_comp10389_c0_seq1
282bp
 hypothetical_protein_TcasGA2_TC033836_[Tribolium_castaneum]
FPKM:11.63 TPM:11.70
772 A_BomoSK_comp10389_c0_seq2
341bp
FPKM:4.39 TPM:4.42
773 A_BomoSK_comp1038_c0_seq1
241bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.89 TPM:1.90
774 A_BomoSK_comp103900_c0_seq1
302bp
FPKM:1.94 TPM:1.96
775 A_BomoSK_comp103905_c0_seq1
2900bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_12_[Papilio_machaon]
FPKM:3.91 TPM:3.94
776 A_BomoSK_comp10390_c0_seq1
1275bp
FPKM:26.86 TPM:27.01
777 A_BomoSK_comp10390_c0_seq2
477bp
 PREDICTED:_transmembrane_gamma-carboxyglutamic_acid_protein_4_[Pseudopodoces_humilis]
FPKM:8.18 TPM:8.22
778 A_BomoSK_comp103911_c0_seq1
281bp
 serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:0.59 TPM:0.59
779 A_BomoSK_comp103913_c0_seq1
2219bp
 PREDICTED:_homeobox_protein_5_isoform_X2_[Bombyx_mori]
GO:0046872 F metal ion binding
FPKM:4.01 TPM:4.03
780 A_BomoSK_comp10391_c0_seq1
610bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_helicase_domino_[Bombyx_mori]
FPKM:8.26 TPM:8.31
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