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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
391 A_BomoSK_comp10181_c0_seq4
534bp
 PREDICTED:_uncharacterized_protein_LOC106138121_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
392 A_BomoSK_comp10182_c0_seq1
363bp
 PREDICTED:_uncharacterized_protein_LOC106115331_[Papilio_xuthus]
FPKM:7.38 TPM:7.42
393 A_BomoSK_comp10182_c0_seq2
1363bp
FPKM:3.39 TPM:3.41
394 A_BomoSK_comp10182_c0_seq3
328bp
 PREDICTED:_uncharacterized_protein_LOC106115331_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
395 A_BomoSK_comp10182_c1_seq1
1096bp
FPKM:4.52 TPM:4.54
396 A_BomoSK_comp10183_c0_seq1
1105bp
 PREDICTED:_homeotic_protein_female_sterile_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:6.07 TPM:6.10
397 A_BomoSK_comp10184_c0_seq1
382bp
 PREDICTED:_importin-11_[Bombyx_mori]
FPKM:2.61 TPM:2.62
398 A_BomoSK_comp10185_c0_seq1
2672bp
FPKM:3.96 TPM:3.98
399 A_BomoSK_comp101863_c0_seq1
249bp
 PREDICTED:_spectrin_alpha_chain_isoform_X5_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007308 P oocyte construction
GO:0007417 P central nervous system development
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008360 P regulation of cell shape
GO:0016199 P axon midline choice point recognition
GO:0016323 C basolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0030707 P ovarian follicle cell development
GO:0030721 P spectrosome organization
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0046872 F metal ion binding
GO:0048134 P germ-line cyst formation
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0060429 P epithelium development
FPKM:16.05 TPM:16.14
400 A_BomoSK_comp10186_c0_seq1
369bp
FPKM:4.65 TPM:4.68
401 A_BomoSK_comp10186_c1_seq1
1835bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0031397 P negative regulation of protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:6.31 TPM:6.35
402 A_BomoSK_comp1018838_c0_seq1
220bp
FPKM:1.33 TPM:1.34
403 A_BomoSK_comp10188_c0_seq1
2201bp
FPKM:5.13 TPM:5.16
404 A_BomoSK_comp101895_c0_seq1
1054bp
 PREDICTED:_paired_mesoderm_homeobox_protein_2A-like_[Papilio_machaon]
FPKM:4.02 TPM:4.05
405 A_BomoSK_comp10189_c0_seq1
1399bp
FPKM:4.82 TPM:4.85
406 A_BomoSK_comp10189_c1_seq1
1394bp
 PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_TIM50-C-like_[Papilio_polytes]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0007005 P mitochondrion organization
GO:0007006 P mitochondrial membrane organization
GO:0007067 P mitotic cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0030150 P protein import into mitochondrial matrix
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:6.38 TPM:6.42
407 A_BomoSK_comp10190_c0_seq1
2337bp
 PREDICTED:_spondin-2_[Papilio_xuthus]
FPKM:6.19 TPM:6.23
408 A_BomoSK_comp10191_c0_seq1
1374bp
 PREDICTED:_poly(rC)-binding_protein_3_isoform_X2_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:1990829 F C-rich single-stranded DNA binding
FPKM:2.86 TPM:2.87
409 A_BomoSK_comp10191_c0_seq2
1389bp
 PREDICTED:_poly(rC)-binding_protein_3_isoform_X2_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
FPKM:3.31 TPM:3.33
410 A_BomoSK_comp101936_c0_seq1
2549bp
FPKM:3.59 TPM:3.61
411 A_BomoSK_comp10193_c0_seq1
2768bp
 PREDICTED:_tyrosine-protein_kinase_Btk29A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
FPKM:1.16 TPM:1.16
412 A_BomoSK_comp10193_c0_seq2
2119bp
 hypothetical_protein_KGM_09493_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
FPKM:3.51 TPM:3.54
413 A_BomoSK_comp10194_c0_seq1
881bp
 PREDICTED:_protein_kibra_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0035330 P regulation of hippo signaling
FPKM:6.08 TPM:6.12
414 A_BomoSK_comp10195_c0_seq1
606bp
FPKM:1.75 TPM:1.76
415 A_BomoSK_comp10195_c1_seq1
1309bp
FPKM:2.81 TPM:2.82
416 A_BomoSK_comp10196_c0_seq1
3853bp
 PREDICTED:_nuclear_hormone_receptor_FTZ-F1_beta_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0003712 F transcription coregulator activity
GO:0004879 F nuclear receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0009755 P hormone-mediated signaling pathway
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030522 P intracellular receptor signaling pathway
GO:0035211 P spermathecum morphogenesis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060968 P obsolete regulation of gene silencing
GO:0090575 C RNA polymerase II transcription regulator complex
FPKM:4.27 TPM:4.30
417 A_BomoSK_comp10198_c0_seq1
251bp
 PREDICTED:_uncharacterized_protein_LOC103936853_[Pyrus_x_bretschneideri]
FPKM:0.00 TPM:0.00
418 A_BomoSK_comp10198_c0_seq2
425bp
FPKM:1.19 TPM:1.19
419 A_BomoSK_comp10199_c0_seq1
220bp
 hypothetical_protein_RR48_13886_[Papilio_machaon]
FPKM:0.00 TPM:0.00
420 A_BomoSK_comp1019_c0_seq1
217bp
 hypothetical_protein_EAI_13433,_partial_[Harpegnathos_saltator]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
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