SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10191_c0_seq1
Scaffold_idBomo_Scaf034
NCBI non-redundant
(nr)		PREDICTED:_poly(rC)-binding_protein_3_isoform_X2_[Papilio_polytes]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:1990829 F C-rich single-stranded DNA binding
Transcript
Level		FPKM:2.86 TPM:2.87
ORF EntryO_BomoSK6876_complete:A_BomoSK_comp10191_c0_seq1
Sequence
(Nucleotide)
CCGTCCCAGCGCCCCCCGACCCCGCGCTCCCGCCGCCGCTCTCCAAGTTCGCCTTCTGTA
GCTCCACACTCATGTTGATGAGGTACTGCGCCAACGCCACCGAGTCGGGGTTGCCAGTTA
TAGTGATGGTCCGGTCGGTGCTGCCGCCCTCGCGCTCCTCGCAGTTGGATATCCTGATCA
TTGCGCCGGATATTTGACGGATTTCAGCGATCTTGGTGCCGCCCTTTCCGATGATGCACC
CGATGAGCTCATTGGGCACGGTCATCTCGTGCGACTGCTGGTTGGTGGCGGGCTGGTTGC
GGGACTGGTTCGTAGTGCGCAGCTGCGAGCCGGCCAGAGCCGCCAGTGCAGCAGGATTTA
ATCCTGCAGCATTCCCAGGTCCGAGACCACCGAGGCCCAGGGCAGCGAGACTGGCCAACG
GCGACTTAGCGAGCCCTCCCATGTCTTGGGCTGGGACGGCATAGTTTCCTTGGATAGTGT
AGGCTTGTCCGCCGGCTAGAATCACAGGTCCCGCTACATTTGGCTTTGGTCTGTACGGGA
TTGTTGCTCCCTTCGGAGGGCTCTCTAACATAACACAACAAATATGATAAATGCATTGGG
TTATAGCGTCACAGGTTCCACTGATTGTCACCGCTCGTTCAGTTGAATTCGGCAACATTT
CGCTCGCCACCTGAATGTTGGCACCAGTGACATCACGGATTTCCTTGATTTTTGAGCCCC
CCTTTCCAATAAGTGAGCCACACTGCGAGGCGGGCACAATAAGCCGCAGCGTGATGGGAG
CACGCGATCCGCCGCCTCCGCCCTCATTGAACTGAGTGCACCACTCTTCAAATTTTTTGC
ATATGAGTGTGAATGCCTTGAATATAGCAGTTGTGTTTCCTGTGACAGTAACAATACGCT
CCGGGCATGATCCATCAGAAATATTAATTTTAGCACCGGACTCTTCTCTAAATCTTTTAA
CAATCTCTCCTTTTTTTCCAATAATGCTCCCAACTTCCTTCCCCTGCATAATCAGTCTGA
TAGTGAGGATAACTTTTGAGTCTTCCTCATGGAGAGAAGGGGCTTTCTCCAGGTCCATGC
TGGAGGTTGTGTCCGTTGTGTCACGTGGAATTTTGGCTGCTTATAGGGCTATGTGTGGGC
AGACACAGGGGACACTCCACTCAAACTAATGGCTGGGACTCTGGGGCTCGTGGCACGAAC
TGCAGGCAGGGTAAGCTCGTTATTTTTTCGACATACAAAAATCCATAACAAATCTTAAAT
CTATTATTATCATCGAAATATATTTAAAATCACATGTATCACAATTATTTCTTTGTCGTT
TTTAAGTGTGTAATTAAAAAAATTAAAATAAAAACCCGACAGTGACGCGTCGGG
(1374 bp)

- SilkBase 1999-2023 -