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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_BomoSK_comp10167_c0_seq1
894bp
 hypothetical_protein_RR46_02026_[Papilio_xuthus]
FPKM:5.02 TPM:5.05
362 A_BomoSK_comp10168_c0_seq1
377bp
 hypothetical_protein_RR46_00776_[Papilio_xuthus]
FPKM:1.49 TPM:1.50
363 A_BomoSK_comp10169_c0_seq1
841bp
FPKM:5.85 TPM:5.89
364 A_BomoSK_comp10169_c1_seq1
1132bp
FPKM:10.71 TPM:10.78
365 A_BomoSK_comp1016_c0_seq1
400bp
FPKM:0.80 TPM:0.80
366 A_BomoSK_comp101704_c0_seq1
484bp
 Zinc_finger,_C2H2_[Penicillium_griseofulvum]
FPKM:3.61 TPM:3.63
367 A_BomoSK_comp1017062_c0_seq1
227bp
FPKM:2.35 TPM:2.36
368 A_BomoSK_comp101709_c0_seq1
1904bp
 dnaJ_homolog_subfamily_C_member_16_precursor_[Bombyx_mori]
GO:0005623 C obsolete cell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
FPKM:4.22 TPM:4.25
369 A_BomoSK_comp10171_c0_seq1
255bp
 hypothetical_protein_RR48_13886_[Papilio_machaon]
FPKM:7.82 TPM:7.87
370 A_BomoSK_comp10172_c0_seq1
4234bp
 PREDICTED:_protein_expanded_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0005515 F protein binding
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005915 C zonula adherens
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007050 P regulation of cell cycle
GO:0007096 P regulation of exit from mitosis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007444 P imaginal disc development
GO:0008101 P BMP signaling pathway
GO:0008285 P negative regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030707 P ovarian follicle cell development
GO:0032456 P endocytic recycling
GO:0035329 P hippo signaling
GO:0035330 P regulation of hippo signaling
GO:0035331 P negative regulation of hippo signaling
GO:0036375 C Kibra-Ex-Mer complex
GO:0040008 P regulation of growth
GO:0042127 P regulation of cell population proliferation
GO:0042327 P positive regulation of phosphorylation
GO:0042981 P regulation of apoptotic process
GO:0045571 P negative regulation of imaginal disc growth
GO:0045595 P regulation of cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046620 P regulation of organ growth
GO:0046621 P negative regulation of organ growth
FPKM:6.04 TPM:6.07
371 A_BomoSK_comp10173_c1_seq1
715bp
 PREDICTED:_uncharacterized_protein_LOC106107572_isoform_X2_[Papilio_polytes]
FPKM:5.01 TPM:5.04
372 A_BomoSK_comp10174_c0_seq1
494bp
FPKM:6.25 TPM:6.29
373 A_BomoSK_comp10175_c0_seq1
1157bp
 PREDICTED:_WASH_complex_subunit_CCDC53_homolog_[Plutella_xylostella]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0071203 C WASH complex
FPKM:1.13 TPM:1.13
374 A_BomoSK_comp10175_c0_seq2
1023bp
 PREDICTED:_WASH_complex_subunit_CCDC53_homolog_[Plutella_xylostella]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0071203 C WASH complex
FPKM:2.19 TPM:2.21
375 A_BomoSK_comp10175_c0_seq3
1070bp
 PREDICTED:_WASH_complex_subunit_CCDC53_homolog_[Plutella_xylostella]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0071203 C WASH complex
FPKM:2.98 TPM:3.00
376 A_BomoSK_comp10176_c0_seq1
300bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
FPKM:0.99 TPM:0.99
377 A_BomoSK_comp101772_c0_seq1
403bp
FPKM:3.66 TPM:3.68
378 A_BomoSK_comp10177_c0_seq1
836bp
 PREDICTED:_myb/SANT-like_DNA-binding_domain-containing_protein_3_[Plutella_xylostella]
FPKM:7.72 TPM:7.76
379 A_BomoSK_comp10178_c0_seq1
3092bp
 PREDICTED:_lon_protease_homolog,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009725 P response to hormone
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0032042 P mitochondrial DNA metabolic process
GO:0034599 P cellular response to oxidative stress
GO:0042645 C mitochondrial nucleoid
GO:0043531 F ADP binding
GO:0043565 F sequence-specific DNA binding
GO:0043623 P protein-containing complex assembly
GO:0051131 P chaperone-mediated protein complex assembly
GO:0051260 P protein homooligomerization
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0051880 F G-quadruplex DNA binding
GO:0070182 F DNA polymerase binding
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
GO:0070362 F mitochondrial promoter sequence-specific DNA binding
GO:0070363 F mitochondrial promoter sequence-specific DNA binding
GO:0070364 F mitochondrial promoter sequence-specific DNA binding
GO:0070407 P oxidation-dependent protein catabolic process
FPKM:1.98 TPM:1.99
380 A_BomoSK_comp10178_c0_seq2
2963bp
 PREDICTED:_lon_protease_homolog,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009725 P response to hormone
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0034599 P cellular response to oxidative stress
GO:0042645 C mitochondrial nucleoid
GO:0043531 F ADP binding
GO:0043565 F sequence-specific DNA binding
GO:0043623 P protein-containing complex assembly
GO:0051131 P chaperone-mediated protein complex assembly
GO:0051260 P protein homooligomerization
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0051880 F G-quadruplex DNA binding
GO:0070182 F DNA polymerase binding
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
GO:0070362 F mitochondrial promoter sequence-specific DNA binding
GO:0070407 P oxidation-dependent protein catabolic process
FPKM:4.43 TPM:4.46
381 A_BomoSK_comp10178_c0_seq3
3146bp
 PREDICTED:_lon_protease_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030163 P protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0051131 P chaperone-mediated protein complex assembly
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
FPKM:0.38 TPM:0.38
382 A_BomoSK_comp10178_c0_seq4
3017bp
 PREDICTED:_lon_protease_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030163 P protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0051131 P chaperone-mediated protein complex assembly
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
FPKM:0.71 TPM:0.71
383 A_BomoSK_comp10179_c0_seq1
4497bp
 PREDICTED:_tolloid-like_protein_1_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
FPKM:4.87 TPM:4.90
384 A_BomoSK_comp101806_c0_seq1
1125bp
FPKM:4.86 TPM:4.89
385 A_BomoSK_comp10180_c0_seq1
482bp
 PREDICTED:_C-Maf-inducing_protein-like_[Amyelois_transitella]
FPKM:1.72 TPM:1.73
386 A_BomoSK_comp10180_c1_seq1
305bp
 putative_c-Maf-inducing_protein_Tc-mip_isoform_isoform_1_[Danaus_plexippus]
FPKM:0.95 TPM:0.95
387 A_BomoSK_comp101819_c0_seq1
957bp
 membrane_protein_MmpS_[Mycobacterium_lentiflavum]
FPKM:4.02 TPM:4.04
388 A_BomoSK_comp10181_c0_seq1
664bp
 PREDICTED:_uncharacterized_protein_LOC106138121_[Amyelois_transitella]
FPKM:4.44 TPM:4.46
389 A_BomoSK_comp10181_c0_seq2
513bp
 PREDICTED:_uncharacterized_protein_LOC106138121_[Amyelois_transitella]
FPKM:1.86 TPM:1.87
390 A_BomoSK_comp10181_c0_seq3
383bp
 PREDICTED:_probable_N-acetyltransferase_CML3_[Ceratosolen_solmsi_marchali]
FPKM:1.07 TPM:1.07
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