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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2041 A_BomoMG_comp17615_c0_seq1
300bp
 hypothetical_protein_RR48_13886_[Papilio_machaon]
FPKM:2.68 TPM:2.12
2042 A_BomoMG_comp17616_c0_seq1
1424bp
 PREDICTED:_oocyte_zinc_finger_protein_XlCOF6-like_[Bombyx_mori]
GO:0001702 P gastrulation with mouth forming second
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0036498 P IRE1-mediated unfolded protein response
GO:0045786 P negative regulation of cell cycle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:2.18 TPM:1.72
2043 A_BomoMG_comp17617_c0_seq1
224bp
 hypothetical_protein_DQ04_17761000_[Trypanosoma_grayi]
FPKM:4.34 TPM:3.43
2044 A_BomoMG_comp17618_c0_seq1
413bp
 Uncharacterized_protein_OBRU01_08796,_partial_[Operophtera_brumata]
FPKM:2.66 TPM:2.10
2045 A_BomoMG_comp17620_c0_seq1
380bp
 hypothetical_protein_PAERUG_P45_London_17_VIM_2_12_12_04800_[Pseudomonas_aeruginosa]
FPKM:2.56 TPM:2.02
2046 A_BomoMG_comp17620_c1_seq1
556bp
FPKM:2.45 TPM:1.94
2047 A_BomoMG_comp17621_c0_seq1
415bp
 hypothetical_protein_M408DRAFT_227129_[Serendipita_vermifera_MAFF_305830]
FPKM:2.50 TPM:1.97
2048 A_BomoMG_comp17621_c1_seq1
242bp
 PREDICTED:_uncharacterized_protein_LOC105841553_[Bombyx_mori]
FPKM:5.10 TPM:4.03
2049 A_BomoMG_comp17622_c0_seq1
637bp
 PREDICTED:_uncharacterized_protein_LOC105842430_isoform_X2_[Bombyx_mori]
FPKM:1.67 TPM:1.32
2050 A_BomoMG_comp176243_c0_seq1
805bp
FPKM:2.88 TPM:2.27
2051 A_BomoMG_comp176244_c0_seq1
1077bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X1_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0008101 P BMP signaling pathway
GO:0010629 P negative regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040008 P regulation of growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0048619 P embryonic hindgut morphogenesis
FPKM:2.59 TPM:2.05
2052 A_BomoMG_comp17624_c0_seq1
290bp
 PREDICTED:_uncharacterized_protein_LOC106108964_[Papilio_polytes]
FPKM:3.39 TPM:2.68
2053 A_BomoMG_comp17625_c0_seq1
398bp
 hypothetical_protein_OCBIM_22030354mg,_partial_[Octopus_bimaculoides]
FPKM:1.78 TPM:1.41
2054 A_BomoMG_comp17626_c0_seq1
412bp
FPKM:1.40 TPM:1.11
2055 A_BomoMG_comp17627_c0_seq1
314bp
 PREDICTED:_histone-lysine_N-methyltransferase_2D-like,_partial_[Bombyx_mori]
FPKM:2.90 TPM:2.29
2056 A_BomoMG_comp17627_c1_seq1
312bp
 PREDICTED:_histone-lysine_N-methyltransferase_2D-like,_partial_[Bombyx_mori]
FPKM:3.39 TPM:2.68
2057 A_BomoMG_comp17628_c0_seq1
506bp
 PREDICTED:_HEAT_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
GO:0016020 C membrane
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:2.07 TPM:1.64
2058 A_BomoMG_comp176297_c0_seq1
548bp
 PREDICTED:_A-kinase_anchor_protein_10,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0008104 P protein localization
GO:0016020 C membrane
GO:0051018 F protein kinase A binding
FPKM:3.24 TPM:2.56
2059 A_BomoMG_comp17629_c0_seq1
463bp
 PREDICTED:_lipase_3-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0007586 P digestion
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
FPKM:2.71 TPM:2.14
2060 A_BomoMG_comp17630_c0_seq1
444bp
FPKM:2.50 TPM:1.98
2061 A_BomoMG_comp176319_c0_seq1
219bp
FPKM:2.57 TPM:2.03
2062 A_BomoMG_comp17631_c0_seq1
913bp
 cyclin_dependent_kinase_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005176 F ErbB-2 class receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007399 P nervous system development
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030182 P neuron differentiation
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030549 F acetylcholine receptor activator activity
GO:0031175 P neuron projection development
GO:0031594 C neuromuscular junction
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043125 F ErbB-3 class receptor binding
GO:0043204 C perikaryon
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048511 P rhythmic process
GO:0050321 F tau-protein kinase activity
GO:0051301 P cell division
GO:0061001 P regulation of dendritic spine morphogenesis
GO:2000273 P positive regulation of signaling receptor activity
FPKM:2.18 TPM:1.72
2063 A_BomoMG_comp17634_c0_seq1
1347bp
 PREDICTED:_zinc_finger_protein_704_[Papilio_polytes]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.95 TPM:1.54
2064 A_BomoMG_comp176350_c0_seq1
1267bp
 PREDICTED:_arf-GAP_domain_and_FG_repeat-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0003677 F DNA binding
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0016023 C cytoplasmic vesicle
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0045109 P intermediate filament organization
GO:0046872 F metal ion binding
FPKM:3.35 TPM:2.64
2065 A_BomoMG_comp17636_c0_seq1
257bp
 abhydrolase_domain_containing_11_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
FPKM:4.75 TPM:3.75
2066 A_BomoMG_comp17638_c0_seq1
430bp
FPKM:2.89 TPM:2.28
2067 A_BomoMG_comp17639_c0_seq1
208bp
FPKM:3.01 TPM:2.38
2068 A_BomoMG_comp17639_c1_seq1
297bp
 Enoyl-CoA_hydratase_[Echinococcus_granulosus]
FPKM:2.98 TPM:2.36
2069 A_BomoMG_comp17641_c0_seq1
234bp
 PREDICTED:_non-structural_maintenance_of_chromosomes_element_1_homolog_[Plutella_xylostella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006301 P postreplication repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0019789 F SUMO transferase activity
GO:0030915 C Smc5-Smc6 complex
GO:0046872 F metal ion binding
GO:2001022 P positive regulation of response to DNA damage stimulus
FPKM:2.14 TPM:1.69
2070 A_BomoMG_comp17641_c1_seq1
252bp
 PREDICTED:_non-structural_maintenance_of_chromosomes_element_1_homolog_[Amyelois_transitella]
FPKM:2.49 TPM:1.97
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