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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2071 A_BomoMG_comp17642_c0_seq1
230bp
 hypothetical_protein_AMS27_04090_[Bacteroides_sp._SM23_62_1]
FPKM:6.28 TPM:4.96
2072 A_BomoMG_comp17644_c0_seq1
832bp
FPKM:2.28 TPM:1.80
2073 A_BomoMG_comp17644_c1_seq1
366bp
 PREDICTED:_glucuronoxylan_4-O-methyltransferase_3-like_[Musa_acuminata_subsp._malaccensis]
FPKM:3.06 TPM:2.42
2074 A_BomoMG_comp17645_c0_seq1
331bp
 PREDICTED:_cytoplasmic_tRNA_2-thiolation_protein_2_[Amyelois_transitella]
GO:0000049 F tRNA binding
GO:0002098 P tRNA wobble uridine modification
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016779 F nucleotidyltransferase activity
GO:0032447 P protein urmylation
GO:0034227 P tRNA thio-modification
FPKM:1.65 TPM:1.30
2075 A_BomoMG_comp17645_c0_seq2
315bp
 PREDICTED:_cytoplasmic_tRNA_2-thiolation_protein_2_[Amyelois_transitella]
FPKM:1.74 TPM:1.38
2076 A_BomoMG_comp17646_c0_seq1
487bp
FPKM:1.97 TPM:1.55
2077 A_BomoMG_comp17649_c0_seq1
437bp
FPKM:2.18 TPM:1.72
2078 A_BomoMG_comp17650_c0_seq1
1178bp
 PREDICTED:_nuclear_pore_complex_protein_Nup153-like_[Bombyx_mori]
FPKM:1.94 TPM:1.54
2079 A_BomoMG_comp17651_c0_seq1
407bp
FPKM:2.86 TPM:2.26
2080 A_BomoMG_comp176529_c0_seq1
275bp
FPKM:0.29 TPM:0.23
2081 A_BomoMG_comp17652_c0_seq1
443bp
 PREDICTED:_lipase_3-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0007586 P digestion
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
FPKM:3.39 TPM:2.68
2082 A_BomoMG_comp176538_c0_seq1
584bp
 PREDICTED:_beta-1,4-galactosyltransferase_2-like_[Papilio_polytes]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009636 P response to toxic substance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0033207 F beta-1,4-N-acetylgalactosaminyltransferase activity
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0075015 P formation of infection structure
FPKM:4.00 TPM:3.16
2083 A_BomoMG_comp17653_c0_seq1
344bp
 TRAS3_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.65 TPM:2.09
2084 A_BomoMG_comp17654_c0_seq1
443bp
 TetR_family_transcriptional_regulator_[Dehalococcoides_mccartyi]
FPKM:2.76 TPM:2.18
2085 A_BomoMG_comp17654_c1_seq1
389bp
FPKM:2.31 TPM:1.82
2086 A_BomoMG_comp17655_c0_seq1
927bp
 PREDICTED:_nesprin-1-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
FPKM:2.47 TPM:1.95
2087 A_BomoMG_comp17655_c1_seq1
773bp
 PREDICTED:_nesprin-1-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
FPKM:1.84 TPM:1.45
2088 A_BomoMG_comp17656_c0_seq1
350bp
FPKM:2.20 TPM:1.74
2089 A_BomoMG_comp17657_c0_seq1
604bp
 PREDICTED:_tRNA_(cytidine(32)-2'-O)-methyltransferase_non-catalytic_subunit_TRM732_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0030488 P tRNA methylation
FPKM:2.93 TPM:2.31
2090 A_BomoMG_comp17657_c1_seq1
601bp
 PREDICTED:_tRNA_(cytidine(32)-2'-O)-methyltransferase_non-catalytic_subunit_TRM732_[Bombyx_mori]
FPKM:1.88 TPM:1.49
2091 A_BomoMG_comp17658_c0_seq1
430bp
 PREDICTED:_hemicentin-1_isoform_X6_[Papilio_xuthus]
GO:0000165 P MAPK cascade
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0032836 P glomerular basement membrane development
GO:0035418 P protein localization to synapse
GO:0036057 C slit diaphragm
GO:0042995 C cell projection
GO:0044062 P regulation of excretion
GO:0070062 C extracellular exosome
GO:0072015 P glomerular visceral epithelial cell development
FPKM:2.50 TPM:1.97
2092 A_BomoMG_comp17659_c0_seq1
712bp
FPKM:2.10 TPM:1.66
2093 A_BomoMG_comp17661_c0_seq1
390bp
 PREDICTED:_uncharacterized_protein_LOC101006303_[Papio_anubis]
FPKM:2.76 TPM:2.18
2094 A_BomoMG_comp17662_c0_seq1
618bp
 PREDICTED:_guanine_nucleotide_binding_protein_isoform_X2_[Bombyx_mori]
FPKM:2.84 TPM:2.24
2095 A_BomoMG_comp17663_c0_seq1
549bp
 PREDICTED:_nucleolar_protein_10_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
FPKM:2.50 TPM:1.97
2096 A_BomoMG_comp17663_c1_seq1
648bp
 PREDICTED:_nucleolar_protein_10_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
FPKM:2.45 TPM:1.93
2097 A_BomoMG_comp176646_c0_seq1
242bp
FPKM:2.36 TPM:1.86
2098 A_BomoMG_comp17664_c0_seq1
534bp
 PREDICTED:_nucleosome-remodeling_factor_subunit_NURF301_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
FPKM:2.50 TPM:1.97
2099 A_BomoMG_comp17665_c0_seq1
435bp
FPKM:1.30 TPM:1.02
2100 A_BomoMG_comp17665_c0_seq2
418bp
FPKM:0.54 TPM:0.43
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