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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp176244_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0008101 P BMP signaling pathway
GO:0010629 P negative regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040008 P regulation of growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0048619 P embryonic hindgut morphogenesis
Transcript
Level		FPKM:2.59 TPM:2.05
ORF EntryO_BomoMG28485_3prime_partial:A_BomoMG_comp176244_c0_seq1
Sequence
(Nucleotide)
GGCGAACCGAAGTTTAGAAGTTAATTATTTTGTGTAAAATGTTTTTTTAAATCGAACTTA
ATTTGTTATTTTATAATAAAATGTCGACGCCCATGTCAAATCGTAAATATGGAGCCCAAA
AAATTAGGCTAACTATTATATGTGCAAGGAATTTGGTCCGAAAAGATCTCTTTCGTTTGC
CAGATCCTTTTGCCAAAATATCAGTCGACGGCAGTGGCCAAGTATATTCAACAAATACAG
TGAAAGCAACACTTGATCCAAAATGGAATACACATTATGATCTTTATTTAAGCAAAGGAG
ATGGAATTACCATAAGTGTATGGAACCAACGCAAAGTCCACAAAAGGCAAGGGTCTGGTT
TTTTAGGATGTGTTCGTATACAACCATCAACTGTACATAAGCTAAAAGATACAGGATACC
AATGTCTAGAACTCTGTGAAGATGGACAGTCTGGTGAGACGTGTGGAGTCAAAGGCCAGG
TCATAATTTCTCTTATGTCAAGAGATAGTGCCCGTGGGGAGCCCGCCTCTGCAGCCGGCG
AGGGTTCTCCATTGGCAGTTGTTGGTCCTGCAGGAGAAGTTCGACCTCCTAGAGAACCAG
TAGTCAGTCCAAACCCCTCTCAGCTGAGTTTACCACCTCATTGGGAGGAGAGATTCACTT
CTAGTGGAAGGCCTTACTTTGTAAATCATTCGACACGTCGCACTCAATGGGAGCGTCCAA
CATCTGAGGGCTCAGAATCACCATCCCCTCCAACATCTCCGGCACTTGTCCCGAGTCCAA
CCACTTCACCTACGTTAACAAGTGCACCTTCCTCTCCTGGTTCTGATACTGACGTGAATC
CTGCTACAACAATATCCTTGAGACCAGAACCCCAGCCACAGACTGCAGTACGTCGACAAC
CCGCAACTTGTACGCCTCCGACCAGCCCTTCATCTCCCACCACTCCTAACACAGCTGCGC
CTGCTCCGATATCAGCTACAGATTTACCTCCAGGATATGAGATGCGCACAACGGCGCAGG
GCCAGGTTTACTTCTACAACAGCGCTACTGGAGCGTCGACGTGGCACGACCCGCGCG
(1077 bp)

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