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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5341 A_BomoFB_comp111871_c0_seq1
238bp
FPKM:3.60 TPM:3.94
5342 A_BomoFB_comp111892_c0_seq1
1647bp
 PREDICTED:_E3_ubiquitin-protein_ligase_Topors-like_[Papilio_machaon]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0000922 C spindle pole
GO:0000930 C gamma-tubulin complex
GO:0003677 F DNA binding
GO:0003823 F antigen binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005814 C centriole
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0032391 C photoreceptor connecting cilium
GO:0034504 P protein localization to nucleus
GO:0036064 C ciliary basal body
GO:0042127 P regulation of cell population proliferation
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044547 F DNA topoisomerase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0051457 P maintenance of protein location in nucleus
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
FPKM:2.89 TPM:3.17
5343 A_BomoFB_comp1118_c0_seq1
391bp
 PREDICTED:_DNA-directed_RNA_polymerase,_mitochondrial_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
FPKM:1.56 TPM:1.71
5344 A_BomoFB_comp11194_c0_seq1
1220bp
 PREDICTED:_aquaporin_AQPAe.a-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:100.37 TPM:109.97
5345 A_BomoFB_comp11197_c0_seq1
1954bp
 PREDICTED:_acyl-CoA_desaturase_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:191.31 TPM:209.62
5346 A_BomoFB_comp111_c1_seq1
216bp
 PREDICTED:_organic_cation_transporter_protein-like_isoform_X2_[Bombyx_mori]
FPKM:2.59 TPM:2.84
5347 A_BomoFB_comp11206_c0_seq1
871bp
 peptidoglycan_recognition_protein_precursor_[Bombyx_mori]
GO:0002376 P immune system process
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
FPKM:216.30 TPM:237.00
5348 A_BomoFB_comp1120_c0_seq1
293bp
conserved_hypothetical_protein_[Flavobacteria_bacterium_MS024-3C]
FPKM:1.75 TPM:1.92
5349 A_BomoFB_comp1121001_c0_seq1
217bp
 PREDICTED:_uncharacterized_protein_LOC105254802,_partial_[Camponotus_floridanus]
FPKM:2.54 TPM:2.79
5350 A_BomoFB_comp11216_c0_seq1
2673bp
 phenylalanine_hydroxylase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004505 F phenylalanine 4-monooxygenase activity
GO:0004510 F tryptophan 5-monooxygenase activity
GO:0005506 F iron ion binding
GO:0005811 C lipid droplet
GO:0006559 P L-phenylalanine catabolic process
GO:0006726 P eye pigment biosynthetic process
GO:0006909 P phagocytosis
GO:0007616 P long-term memory
GO:0008152 P metabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016491 F oxidoreductase activity
GO:0016597 F amino acid binding
GO:0016714 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen
GO:0042427 P serotonin biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:154.14 TPM:168.89
5351 A_BomoFB_comp1122014_c0_seq1
204bp
FPKM:1.66 TPM:1.82
5352 A_BomoFB_comp112209_c0_seq1
1523bp
 PREDICTED:_RUN_domain-containing_protein_1_[Amyelois_transitella]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:3.24 TPM:3.55
5353 A_BomoFB_comp112226_c0_seq1
482bp
FPKM:2.72 TPM:2.98
5354 A_BomoFB_comp112234_c0_seq1
308bp
FPKM:0.00 TPM:0.00
5355 A_BomoFB_comp1122438_c0_seq1
218bp
FPKM:2.50 TPM:2.74
5356 A_BomoFB_comp112244_c0_seq1
397bp
 PREDICTED:_uncharacterized_protein_LOC106125593,_partial_[Papilio_xuthus]
FPKM:4.31 TPM:4.72
5357 A_BomoFB_comp1122574_c0_seq1
210bp
 PREDICTED:_uncharacterized_protein_LOC106708941_[Papilio_machaon]
FPKM:1.46 TPM:1.60
5358 A_BomoFB_comp11225_c0_seq1
995bp
 PREDICTED:_insecticyanin-A-like_[Papilio_polytes]
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016787 F hydrolase activity
GO:0031409 F pigment binding
FPKM:195.74 TPM:214.48
5359 A_BomoFB_comp112267_c0_seq1
1087bp
FPKM:2.82 TPM:3.09
5360 A_BomoFB_comp112272_c0_seq1
1646bp
 PREDICTED:_uncharacterized_protein_LOC101740850_isoform_X1_[Bombyx_mori]
FPKM:2.78 TPM:3.05
5361 A_BomoFB_comp1122_c0_seq1
225bp
 uracil_phosphoribosyltransferase_[Aspergillus_niger]
FPKM:1.10 TPM:1.21
5362 A_BomoFB_comp112313_c0_seq1
1097bp
 wings_apart-like_protein_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006325 P chromatin organization
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0051321 P meiotic cell cycle
FPKM:3.09 TPM:3.38
5363 A_BomoFB_comp112320_c0_seq1
1226bp
 replication_factor_C4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:3.33 TPM:3.65
5364 A_BomoFB_comp11236_c0_seq1
1171bp
 PREDICTED:_aldose_reductase-like_isoform_X2_[Papilio_polytes]
GO:0001894 P tissue homeostasis
GO:0004032 F alditol:NADP+ 1-oxidoreductase activity
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005996 P monosaccharide metabolic process
GO:0006061 P sorbitol biosynthetic process
GO:0009414 P response to water deprivation
GO:0010033 P response to organic substance
GO:0016491 F oxidoreductase activity
GO:0018931 P naphthalene catabolic process
GO:0031098 P stress-activated protein kinase signaling cascade
GO:0032838 C plasma membrane bounded cell projection cytoplasm
GO:0033010 C paranodal junction
GO:0042415 P norepinephrine metabolic process
GO:0042629 C mast cell granule
GO:0043220 C Schmidt-Lanterman incisure
GO:0043795 F glyceraldehyde oxidoreductase activity
GO:0044597 P daunorubicin metabolic process
GO:0044598 P doxorubicin metabolic process
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048471 C perinuclear region of cytoplasm
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0055114 P obsolete oxidation-reduction process
GO:0060135 P maternal process involved in female pregnancy
GO:0070062 C extracellular exosome
GO:0070301 P cellular response to hydrogen peroxide
GO:0072061 P inner medullary collecting duct development
GO:0097066 P response to thyroid hormone
GO:0097238 P cellular response to methylglyoxal
GO:0097454 C Schwann cell microvillus
GO:1901653 P cellular response to peptide
FPKM:263.21 TPM:288.41
5365 A_BomoFB_comp112378_c0_seq1
614bp
 PREDICTED:_sorting_nexin-14-like_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021680 P cerebellar Purkinje cell layer development
GO:0030425 C dendrite
GO:0030902 P hindbrain development
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042995 C cell projection
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0097352 P autophagosome maturation
FPKM:3.78 TPM:4.14
5366 A_BomoFB_comp1123_c0_seq1
748bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.35 TPM:1.47
5367 A_BomoFB_comp11240_c0_seq1
442bp
 PREDICTED:_cytochrome_c_oxidase_subunit_7C,_mitochondrial-like_[Plutella_xylostella]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
FPKM:281.44 TPM:308.38
5368 A_BomoFB_comp1124240_c0_seq1
205bp
 PREDICTED:_zinc_finger_protein_Xfin-like_[Papilio_polytes]
FPKM:1.62 TPM:1.78
5369 A_BomoFB_comp11242_c0_seq1
1173bp
 triosephosphate_isomerase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0004807 F triose-phosphate isomerase activity
GO:0005575 C cellular_component
GO:0006094 P gluconeogenesis
GO:0006096 P glycolytic process
GO:0006098 P pentose-phosphate shunt
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
FPKM:213.16 TPM:233.57
5370 A_BomoFB_comp112455_c0_seq1
844bp
 PREDICTED:_uncharacterized_protein_LOC101742468_isoform_X1_[Bombyx_mori]
FPKM:3.12 TPM:3.42
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