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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5371 A_BomoFB_comp112499_c0_seq1
315bp
 hypothetical_protein_[Paenibacillus_sp._Root444D2]
FPKM:1.63 TPM:1.79
5372 A_BomoFB_comp112533_c0_seq1
571bp
 PREDICTED:_uncharacterized_protein_LOC106103926_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
FPKM:3.36 TPM:3.68
5373 A_BomoFB_comp112574_c0_seq1
2381bp
 PREDICTED:_intersectin-1_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0007264 P small GTPase mediated signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019209 F kinase activator activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0032947 F molecular adaptor activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070064 F proline-rich region binding
FPKM:2.30 TPM:2.52
5374 A_BomoFB_comp1125_c0_seq1
314bp
FPKM:0.41 TPM:0.45
5375 A_BomoFB_comp11267_c0_seq1
484bp
 hypothetical_protein_KGM_17991_[Danaus_plexippus]
FPKM:267.28 TPM:292.86
5376 A_BomoFB_comp11268_c0_seq1
579bp
 cuticular_protein_RR-1_motif_46_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:262.85 TPM:288.01
5377 A_BomoFB_comp112706_c0_seq1
1143bp
FPKM:2.54 TPM:2.79
5378 A_BomoFB_comp112711_c0_seq1
1538bp
 PREDICTED:_myosin-IB_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
FPKM:2.68 TPM:2.94
5379 A_BomoFB_comp112734_c0_seq1
609bp
FPKM:2.68 TPM:2.93
5380 A_BomoFB_comp112740_c0_seq1
1186bp
FPKM:2.81 TPM:3.08
5381 A_BomoFB_comp112782_c0_seq1
1007bp
 hypothetical_protein_KGM_15528_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
FPKM:2.64 TPM:2.89
5382 A_BomoFB_comp1127_c0_seq1
222bp
FPKM:2.32 TPM:2.55
5383 A_BomoFB_comp112836_c0_seq1
264bp
 hypothetical_protein_EGK_13618,_partial_[Macaca_mulatta]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.65 TPM:0.71
5384 A_BomoFB_comp112850_c0_seq1
2049bp
 PREDICTED:_huntingtin_[Bombyx_mori]
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007417 P central nervous system development
GO:0008134 F transcription factor binding
GO:0014069 C postsynaptic density
GO:0030136 C clathrin-coated vesicle
GO:0030424 C axon
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0048513 P animal organ development
GO:0051028 P mRNA transport
GO:0071598 C neuronal ribonucleoprotein granule
GO:1904580 P regulation of intracellular mRNA localization
GO:2000117 P negative regulation of cysteine-type endopeptidase activity
FPKM:3.40 TPM:3.73
5385 A_BomoFB_comp112896_c0_seq1
298bp
FPKM:1.87 TPM:2.04
5386 A_BomoFB_comp1128_c0_seq1
376bp
 PREDICTED:_zinc_finger_C2HC_domain-containing_protein_1C_[Amyelois_transitella]
FPKM:1.12 TPM:1.23
5387 A_BomoFB_comp1129282_c0_seq1
214bp
 hypothetical_protein_[Podospora_anserina_S_mat+]
FPKM:1.35 TPM:1.48
5388 A_BomoFB_comp112938_c0_seq1
481bp
FPKM:3.32 TPM:3.64
5389 A_BomoFB_comp11295_c0_seq1
456bp
 hypothetical_protein_KGM_10332_[Danaus_plexippus]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:1902600 P proton transmembrane transport
FPKM:252.11 TPM:276.25
5390 A_BomoFB_comp112996_c0_seq1
1174bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030426 C growth cone
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045178 C basal part of cell
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
FPKM:3.01 TPM:3.30
5391 A_BomoFB_comp1129_c0_seq1
237bp
FPKM:3.65 TPM:4.00
5392 A_BomoFB_comp112_c0_seq1
212bp
 enzymatic_polyprotein_endonuclease_reverse_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.40 TPM:1.54
5393 A_BomoFB_comp11305_c0_seq1
707bp
FPKM:20.20 TPM:22.14
5394 A_BomoFB_comp1130_c0_seq1
256bp
FPKM:0.00 TPM:0.00
5395 A_BomoFB_comp1131935_c0_seq1
215bp
 hypothetical_protein_PAXINDRAFT_87332,_partial_[Paxillus_involutus_ATCC_200175]
FPKM:2.64 TPM:2.89
5396 A_BomoFB_comp1131994_c0_seq1
230bp
FPKM:1.02 TPM:1.11
5397 A_BomoFB_comp11320_c0_seq1
1171bp
 hypothetical_protein_KGM_07241_[Danaus_plexippus]
FPKM:253.54 TPM:277.81
5398 A_BomoFB_comp11322_c0_seq1
945bp
 PREDICTED:_insecticyanin-A-like_isoform_X1_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0018298 P protein-chromophore linkage
GO:0031409 F pigment binding
FPKM:193.30 TPM:211.80
5399 A_BomoFB_comp113272_c0_seq1
1318bp
 PREDICTED:_uncharacterized_protein_LOC106132957_[Amyelois_transitella]
FPKM:2.44 TPM:2.67
5400 A_BomoFB_comp113305_c0_seq1
230bp
FPKM:2.03 TPM:2.23
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