SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp112378_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-14-like_[Bombyx_mori]
Ontology
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021680 P cerebellar Purkinje cell layer development
GO:0030425 C dendrite
GO:0030902 P hindbrain development
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042995 C cell projection
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0097352 P autophagosome maturation
Transcript
Level		FPKM:3.78 TPM:4.14
ORF EntryO_BomoFB19967_5prime_partial:A_BomoFB_comp112378_c0_seq1
Sequence
(Nucleotide)
GGGCGTGCAGCGGCTGGAGGGCGCGCTGTGCTACCGCGTGCTGCGCCGCACGGAGCACGA
CTTCCACCTGCTGCGGAGCAAGCTGCACGAGTTCCACGGGGACGCGCTGCTGCACGACCT
GCCGCTGCCCTCCAGGAGAGACAACAGTCCATTGGAGACTATACGGTACAAGTACGAAGA
TTTCCTTCAGCGTCTGCTGCAGAAGAGTCTGTTGCAGACGAGCGAGCTGCTCAGGCTGTT
CCTCACGGAGGAGGGAGACTTTTCCCTGGCGGTCCAGGCGTCGACCCTCAACGCAAGCAG
CACAGACCTGCTGAACATCTATCAGTCCGTCACCCACAAGCTGAGGAAGGAGAAGGGGCA
GCACCTGGAGAGCTTCCTGAGGAATCTGCTCGTGTCTTCAGACAGGGACCGGTACCGGGC
ACTCAAACAAGGTCGAGAGGTGGAGGAGGCGGTGGAGGTCAGCGAAGAGGTGGAGGCGGA
GCAGCGGAGCGCCGGGCCGCGGCGCCCGCGCGACCTCACGGCCTCCGTGTTTGGGAACAA
CTTCGACGTGGAGTCCGGCCCCGTTACGTCAGCGCCCGCCCACCGGACCCCCGTCGCCGG
CCTCACTCAGTGCG
(614 bp)

- SilkBase 1999-2023 -