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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4801 A_BomoFB_comp1060794_c0_seq1
211bp
FPKM:1.43 TPM:1.57
4802 A_BomoFB_comp106080_c0_seq1
1373bp
FPKM:2.60 TPM:2.85
4803 A_BomoFB_comp1061072_c0_seq1
215bp
FPKM:2.64 TPM:2.89
4804 A_BomoFB_comp10610_c0_seq1
456bp
 ribosomal_protein_P1_[Antheraea_yamamai]
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030295 F protein kinase activator activity
GO:0030529 C ribonucleoprotein complex
GO:0030687 C preribosome, large subunit precursor
GO:0032147 P activation of protein kinase activity
GO:0045860 P positive regulation of protein kinase activity
GO:0070180 F large ribosomal subunit rRNA binding
FPKM:2065.01 TPM:2262.68
4805 A_BomoFB_comp106121_c0_seq1
291bp
FPKM:1.49 TPM:1.63
4806 A_BomoFB_comp1061253_c0_seq1
222bp
FPKM:1.16 TPM:1.27
4807 A_BomoFB_comp106125_c0_seq1
704bp
 cytochrome_P450_CYP6AE7_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
FPKM:3.13 TPM:3.43
4808 A_BomoFB_comp10612_c0_seq1
1160bp
 heat_shock_protein_25.4_precursor_[Bombyx_mori]
FPKM:1169.56 TPM:1281.52
4809 A_BomoFB_comp106137_c0_seq1
1037bp
FPKM:2.73 TPM:3.00
4810 A_BomoFB_comp1061493_c0_seq1
211bp
 fringe_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001708 P cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005797 C Golgi medial cisterna
GO:0006004 P fucose metabolic process
GO:0006493 P protein O-linked glycosylation
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007389 P pattern specification process
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007451 P dorsal/ventral lineage restriction, imaginal disc
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008194 F UDP-glycosyltransferase activity
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030173 C integral component of Golgi membrane
GO:0033829 F O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0035017 P cuticle pattern formation
GO:0036011 P imaginal disc-derived leg segmentation
GO:0036099 P female germ-line stem cell population maintenance
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048477 P oogenesis
GO:0048749 P compound eye development
FPKM:0.00 TPM:0.00
4811 A_BomoFB_comp10614_c0_seq1
663bp
 ribosomal_protein_L14_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1757.62 TPM:1925.86
4812 A_BomoFB_comp106155_c0_seq1
481bp
 PREDICTED:_PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN2_isoform_X2_[Papilio_polytes]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:2.55 TPM:2.79
4813 A_BomoFB_comp10615_c0_seq1
857bp
 ribosomal_protein_S6_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1505.39 TPM:1649.49
4814 A_BomoFB_comp1061754_c0_seq1
208bp
 MULTISPECIES:_flagellar_biosynthesis_protein_FlgN_[Pseudomonas]
FPKM:0.00 TPM:0.00
4815 A_BomoFB_comp106179_c0_seq1
489bp
 PREDICTED:_uncharacterized_protein_LOC106709836_[Papilio_machaon]
FPKM:3.90 TPM:4.28
4816 A_BomoFB_comp10617_c0_seq1
1308bp
 ribosomal_protein_L13A_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:705.46 TPM:772.99
4817 A_BomoFB_comp10618_c0_seq1
718bp
 ribosomal_protein_S8_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1404.15 TPM:1538.56
4818 A_BomoFB_comp10619_c0_seq1
622bp
 abnormal_wing_disc-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005880 C nuclear microtubule
GO:0005886 C plasma membrane
GO:0006163 P purine nucleotide metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006183 P GTP biosynthetic process
GO:0006220 P pyrimidine nucleotide metabolic process
GO:0006228 P UTP biosynthetic process
GO:0006241 P CTP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007017 P microtubule-based process
GO:0007067 P mitotic cell cycle
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0008017 F microtubule binding
GO:0009117 P nucleotide metabolic process
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0034332 P adherens junction organization
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
FPKM:1590.07 TPM:1742.27
4819 A_BomoFB_comp10620_c0_seq1
1778bp
 aliphatic_nitrilase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019483 P beta-alanine biosynthetic process
GO:0046872 F metal ion binding
FPKM:1113.69 TPM:1220.30
4820 A_BomoFB_comp10621_c0_seq1
550bp
 ribosomal_protein_S16_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1665.21 TPM:1824.60
4821 A_BomoFB_comp106223_c0_seq1
1658bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_F09G8.5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0030030 P cell projection organization
GO:0032391 C photoreceptor connecting cilium
GO:0060271 P cilium assembly
FPKM:2.32 TPM:2.54
4822 A_BomoFB_comp106225_c0_seq1
236bp
FPKM:3.70 TPM:4.06
4823 A_BomoFB_comp1062347_c0_seq1
204bp
 PREDICTED:_uncharacterized_protein_LOC101742011_isoform_X1_[Bombyx_mori]
FPKM:1.66 TPM:1.82
4824 A_BomoFB_comp10624_c0_seq1
837bp
 translationally-controlled_tumor_protein_homolog_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:1305.87 TPM:1430.87
4825 A_BomoFB_comp10625_c0_seq1
320bp
FPKM:24.02 TPM:26.32
4826 A_BomoFB_comp1062621_c0_seq1
209bp
FPKM:2.98 TPM:3.27
4827 A_BomoFB_comp106265_c0_seq1
884bp
 PREDICTED:_epsilon-sarcoglycan_isoform_X2_[Bombyx_mori]
GO:0003012 P muscle system process
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0016012 C sarcoglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:0032590 C dendrite membrane
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0061024 P membrane organization
FPKM:3.41 TPM:3.73
4828 A_BomoFB_comp10626_c0_seq1
516bp
 ribosomal_protein_S17_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1459.57 TPM:1599.29
4829 A_BomoFB_comp10627_c0_seq1
1033bp
 ribosomal_protein_L7A_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007052 P mitotic spindle organization
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0051297 P centrosome cycle
GO:0051298 P centrosome duplication
FPKM:1205.62 TPM:1321.02
4830 A_BomoFB_comp106285_c0_seq1
1530bp
 hypothetical_protein_KGM_21374_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007366 P periodic partitioning by pair rule gene
GO:0008361 P regulation of cell size
GO:0032368 P regulation of lipid transport
GO:0042051 P compound eye photoreceptor development
GO:0051493 P regulation of cytoskeleton organization
FPKM:2.06 TPM:2.25
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