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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp106155_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN2_isoform_X2_[Papilio_polytes]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:2.55 TPM:2.79
ORF EntryO_BomoFB19725_3prime_partial:A_BomoFB_comp106155_c0_seq1
Sequence
(Nucleotide)
TAGAATAGGAACTTTAAAATTTTTATGTGTTTCCTTTTTAGTTGTAAATTGTTGAATTCC
TTTTTAAAAATAATTAGAATCAATGTAGGGAAACAGGATTGTTGTTAAATTAAATATGGA
ATATCATTACTCCGAAATATGTATGCCATCCGATCATCTAACAGATTACACACCCCCTTT
CATCATTCCCACGCATGAAGGGGAATATGAAGCACGTAACAGTGTACTCGTGGATGGAGG
AGAGAGATTTGGAGTTTCGGCAGTTGTGTTCGATAAACATGAAGAGTTGATATGGATGGG
GAATCAGGGTGGTCATGTAACATCCTACTACGGTCCAAATATGCAAAAGTACACATCATT
TCAAGTACACGATACTGATGAAGTTAGAGATATTATCACTGTTGAAAAATGTATTTATGT
TTTGACCAAAACAACTCTACGCCATCAGTTACGTAGAGGTATACCTACGCACACGCACAA
A
(481 bp)

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