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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4771 A_BomoFB_comp105874_c0_seq1
677bp
 PREDICTED:_uncharacterized_protein_LOC106138121_[Amyelois_transitella]
FPKM:3.63 TPM:3.97
4772 A_BomoFB_comp105876_c0_seq1
218bp
FPKM:1.25 TPM:1.37
4773 A_BomoFB_comp10589_c0_seq1
565bp
 ribosomal_protein_P2_[Bombyx_mori]
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0022625 C cytosolic large ribosomal subunit
GO:0022626 C cytosolic ribosome
GO:0030529 C ribonucleoprotein complex
GO:0030687 C preribosome, large subunit precursor
GO:0070180 F large ribosomal subunit rRNA binding
FPKM:2735.50 TPM:2997.35
4774 A_BomoFB_comp1059021_c0_seq1
203bp
FPKM:1.70 TPM:1.86
4775 A_BomoFB_comp10590_c0_seq1
2076bp
 glucose_dehydrogenase_[FAD,_quinone]-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:2805.99 TPM:3074.58
4776 A_BomoFB_comp1059256_c0_seq1
203bp
 hypothetical_protein_UB34_18430,_partial_[Photobacterium_leiognathi]
FPKM:3.40 TPM:3.72
4777 A_BomoFB_comp10592_c0_seq1
601bp
 cuticular_protein_hypothetical_43_[Bombyx_mori]
FPKM:2393.96 TPM:2623.11
4778 A_BomoFB_comp105946_c0_seq1
288bp
 PREDICTED:_transcriptional_adapter_2A_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016573 P histone acetylation
GO:0043966 P histone H3 acetylation
FPKM:6.61 TPM:7.24
4779 A_BomoFB_comp105951_c0_seq1
1666bp
 putative_Egl_nine-like_protein_1_[Danaus_plexippus]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019511 P peptidyl-proline hydroxylation
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0071731 P response to nitric oxide
FPKM:2.75 TPM:3.01
4780 A_BomoFB_comp10595_c0_seq1
1686bp
 imaginal_disk_growth_factor_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008150 P biological_process
FPKM:1895.03 TPM:2076.42
4781 A_BomoFB_comp10596_c0_seq1
1010bp
 myosin_regulatory_light_chain_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016459 C myosin complex
GO:0046872 F metal ion binding
FPKM:1826.30 TPM:2001.12
4782 A_BomoFB_comp1059702_c0_seq1
214bp
FPKM:2.69 TPM:2.95
4783 A_BomoFB_comp10597_c0_seq1
1114bp
 40S_ribosomal_protein_S3a_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:1553.26 TPM:1701.94
4784 A_BomoFB_comp1059825_c0_seq1
239bp
 hypothetical_protein_M673_20370_(plasmid)_[Aureimonas_sp._AU20]
FPKM:0.89 TPM:0.97
4785 A_BomoFB_comp10598_c0_seq1
433bp
 ribosomal_protein_L36_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:2430.16 TPM:2662.77
4786 A_BomoFB_comp105991_c0_seq1
793bp
 trehalase-1b,_partial_[Heliconius_cydno_weymeri]
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005576 C extracellular region
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:2.31 TPM:2.54
4787 A_BomoFB_comp10599_c0_seq1
780bp
 ribosomal_protein_L10_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1954.48 TPM:2141.56
4788 A_BomoFB_comp105_c0_seq1
315bp
FPKM:0.82 TPM:0.89
4789 A_BomoFB_comp106000_c0_seq1
606bp
 PREDICTED:_wee1-like_protein_kinase_[Amyelois_transitella]
FPKM:4.24 TPM:4.64
4790 A_BomoFB_comp106004_c0_seq1
973bp
 PREDICTED:_peripheral_plasma_membrane_protein_CASK_isoform_X7_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005954 C calcium- and calmodulin-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007298 P border follicle cell migration
GO:0007615 P anesthesia-resistant memory
GO:0007616 P long-term memory
GO:0007628 P adult walking behavior
GO:0008049 P male courtship behavior
GO:0008344 P adult locomotory behavior
GO:0008360 P regulation of cell shape
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016020 C membrane
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0031594 C neuromuscular junction
GO:0040011 P locomotion
GO:0040012 P regulation of locomotion
GO:0042043 F neurexin family protein binding
GO:0046331 P lateral inhibition
GO:0046928 P regulation of neurotransmitter secretion
GO:0048488 P synaptic vesicle endocytosis
GO:0061174 C type I terminal bouton
GO:0072375 P medium-term memory
GO:1900073 P regulation of neuromuscular synaptic transmission
GO:1900244 P positive regulation of synaptic vesicle endocytosis
GO:2000331 P regulation of terminal button organization
FPKM:3.78 TPM:4.14
4791 A_BomoFB_comp10600_c0_seq1
427bp
 ribosomal_protein_S25_[Bombyx_mori]
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
FPKM:2242.94 TPM:2457.63
4792 A_BomoFB_comp106027_c0_seq1
345bp
FPKM:3.67 TPM:4.03
4793 A_BomoFB_comp106028_c0_seq1
1593bp
 PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_11-like_[Papilio_xuthus]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0008219 P cell death
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0043065 P positive regulation of apoptotic process
GO:0046777 P protein autophosphorylation
FPKM:3.89 TPM:4.26
4794 A_BomoFB_comp106042_c0_seq1
322bp
 ATP-dependent_DNA_helicase_RecQ_[Pseudoalteromonas_rubra]
FPKM:5.05 TPM:5.53
4795 A_BomoFB_comp106050_c0_seq1
554bp
 PREDICTED:_tyrosine-protein_phosphatase_non-receptor_type_9_isoform_X1_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:3.66 TPM:4.01
4796 A_BomoFB_comp10605_c1_seq1
621bp
 PREDICTED:_phosphatidylethanolamine-binding_protein_homolog_F40A3.3-like_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0008289 F lipid binding
FPKM:1934.99 TPM:2120.21
4797 A_BomoFB_comp106065_c0_seq1
601bp
 PREDICTED:_protein_groucho-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
FPKM:2.34 TPM:2.56
4798 A_BomoFB_comp1060677_c0_seq1
211bp
 hypothetical_protein_GALMADRAFT_154024_[Galerina_marginata_CBS_339.88]
FPKM:2.86 TPM:3.13
4799 A_BomoFB_comp10606_c0_seq1
696bp
 ribosomal_protein_S23_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:1607.49 TPM:1761.35
4800 A_BomoFB_comp106075_c0_seq1
927bp
FPKM:2.78 TPM:3.05
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