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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4231 A_BomoFB_comp10557_c0_seq35
2537bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:0.93 TPM:1.02
4232 A_BomoFB_comp10557_c0_seq36
970bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X1_[Papilio_polytes]
FPKM:2.70 TPM:2.96
4233 A_BomoFB_comp10557_c0_seq37
4782bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.66 TPM:0.72
4234 A_BomoFB_comp10557_c0_seq38
4265bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.00 TPM:0.00
4235 A_BomoFB_comp10557_c0_seq39
890bp
FPKM:0.00 TPM:0.00
4236 A_BomoFB_comp10557_c0_seq4
5297bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.00 TPM:0.00
4237 A_BomoFB_comp10557_c0_seq40
856bp
FPKM:0.00 TPM:0.00
4238 A_BomoFB_comp10557_c0_seq41
2323bp
 PREDICTED:_mitotic_spindle_assembly_checkpoint_protein_MAD1-like_isoform_X1_[Papilio_machaon]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0015629 C actin cytoskeleton
GO:0042130 P negative regulation of T cell proliferation
GO:0048538 P thymus development
GO:0051301 P cell division
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:1901990 P regulation of mitotic cell cycle phase transition
FPKM:2.13 TPM:2.33
4239 A_BomoFB_comp10557_c0_seq42
932bp
FPKM:0.00 TPM:0.00
4240 A_BomoFB_comp10557_c0_seq43
1505bp
FPKM:0.00 TPM:0.00
4241 A_BomoFB_comp10557_c0_seq44
6149bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:3.39 TPM:3.71
4242 A_BomoFB_comp10557_c0_seq45
5300bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:5.05 TPM:5.53
4243 A_BomoFB_comp10557_c0_seq5
639bp
FPKM:0.00 TPM:0.00
4244 A_BomoFB_comp10557_c0_seq6
4268bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:2.36 TPM:2.59
4245 A_BomoFB_comp10557_c0_seq7
815bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4246 A_BomoFB_comp10557_c0_seq8
879bp
FPKM:0.67 TPM:0.74
4247 A_BomoFB_comp10557_c0_seq9
847bp
FPKM:5.48 TPM:6.00
4248 A_BomoFB_comp10558_c0_seq1
301bp
FPKM:1.37 TPM:1.50
4249 A_BomoFB_comp10558_c10_seq1
296bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:6.17 TPM:6.76
4250 A_BomoFB_comp10558_c11_seq1
432bp
FPKM:10.68 TPM:11.70
4251 A_BomoFB_comp10558_c1_seq1
327bp
FPKM:1.88 TPM:2.05
4252 A_BomoFB_comp10558_c2_seq1
320bp
 hypothetical_protein_Y032_0681g1482_[Ancylostoma_ceylanicum]
FPKM:2.76 TPM:3.02
4253 A_BomoFB_comp10558_c3_seq1
421bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase,_partial_[Bombyx_mori]
FPKM:4.33 TPM:4.75
4254 A_BomoFB_comp10558_c5_seq1
236bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4255 A_BomoFB_comp10558_c6_seq1
546bp
 AAEL012061-PA_[Aedes_aegypti]
FPKM:5.38 TPM:5.90
4256 A_BomoFB_comp10558_c7_seq1
391bp
FPKM:1.30 TPM:1.43
4257 A_BomoFB_comp10558_c8_seq1
2757bp
 PREDICTED:_glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X2_[Papilio_polytes]
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
FPKM:0.00 TPM:0.00
4258 A_BomoFB_comp10558_c8_seq10
235bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
4259 A_BomoFB_comp10558_c8_seq11
2954bp
 PREDICTED:_glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X2_[Papilio_polytes]
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
FPKM:0.00 TPM:0.00
4260 A_BomoFB_comp10558_c8_seq12
2797bp
 PREDICTED:_glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X1_[Papilio_polytes]
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
FPKM:0.00 TPM:0.00
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