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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4201 A_BomoFB_comp105574_c0_seq1
600bp
 PREDICTED:_protein_abrupt-like_isoform_X2_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
FPKM:2.86 TPM:3.14
4202 A_BomoFB_comp1055777_c0_seq1
205bp
 PREDICTED:_uncharacterized_protein_LOC103309040_[Acyrthosiphon_pisum]
FPKM:3.25 TPM:3.56
4203 A_BomoFB_comp10557_c0_seq1
468bp
FPKM:2.78 TPM:3.04
4204 A_BomoFB_comp10557_c0_seq10
498bp
 hypothetical_protein_[Lactobacillus_parafarraginis]
FPKM:1.03 TPM:1.13
4205 A_BomoFB_comp10557_c0_seq11
547bp
 PREDICTED:_protein_ZBED8-like_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
4206 A_BomoFB_comp10557_c0_seq12
2736bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4207 A_BomoFB_comp10557_c0_seq13
973bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X1_[Papilio_polytes]
FPKM:0.00 TPM:0.00
4208 A_BomoFB_comp10557_c0_seq14
2849bp
 PREDICTED:_uncharacterized_protein_LOC106136881_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
FPKM:2.99 TPM:3.27
4209 A_BomoFB_comp10557_c0_seq15
201bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:1.78 TPM:1.95
4210 A_BomoFB_comp10557_c0_seq16
2388bp
 PREDICTED:_mitotic_spindle_assembly_checkpoint_protein_MAD1-like_isoform_X1_[Papilio_machaon]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0015629 C actin cytoskeleton
GO:0042130 P negative regulation of T cell proliferation
GO:0048538 P thymus development
GO:0051301 P cell division
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:1901990 P regulation of mitotic cell cycle phase transition
FPKM:2.69 TPM:2.94
4211 A_BomoFB_comp10557_c0_seq17
667bp
FPKM:0.00 TPM:0.00
4212 A_BomoFB_comp10557_c0_seq18
733bp
FPKM:3.38 TPM:3.71
4213 A_BomoFB_comp10557_c0_seq19
286bp
FPKM:3.11 TPM:3.40
4214 A_BomoFB_comp10557_c0_seq2
6146bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.00 TPM:0.00
4215 A_BomoFB_comp10557_c0_seq20
821bp
FPKM:2.27 TPM:2.49
4216 A_BomoFB_comp10557_c0_seq21
311bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4217 A_BomoFB_comp10557_c0_seq22
3750bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.49 TPM:0.54
4218 A_BomoFB_comp10557_c0_seq23
591bp
 PREDICTED:_protein_ZBED8-like_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
4219 A_BomoFB_comp10557_c0_seq24
907bp
FPKM:6.75 TPM:7.39
4220 A_BomoFB_comp10557_c0_seq25
868bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:2.06 TPM:2.26
4221 A_BomoFB_comp10557_c0_seq26
245bp
FPKM:0.00 TPM:0.00
4222 A_BomoFB_comp10557_c0_seq27
211bp
FPKM:0.00 TPM:0.00
4223 A_BomoFB_comp10557_c0_seq28
824bp
 PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4224 A_BomoFB_comp10557_c0_seq29
538bp
 PREDICTED:_protein_ZBED8-like_[Papilio_xuthus]
FPKM:3.21 TPM:3.52
4225 A_BomoFB_comp10557_c0_seq3
269bp
 hypothetical_protein_PPERSA_10142_[Pseudocohnilembus_persalinus]
FPKM:1.64 TPM:1.80
4226 A_BomoFB_comp10557_c0_seq30
1676bp
 PREDICTED:_phospholipase_D3-like_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
FPKM:0.00 TPM:0.00
4227 A_BomoFB_comp10557_c0_seq31
302bp
 hypothetical_protein_Y032_0186g1050_[Ancylostoma_ceylanicum]
FPKM:1.81 TPM:1.98
4228 A_BomoFB_comp10557_c0_seq32
5631bp
 PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:0.51 TPM:0.56
4229 A_BomoFB_comp10557_c0_seq33
355bp
FPKM:0.00 TPM:0.00
4230 A_BomoFB_comp10557_c0_seq34
1667bp
 PREDICTED:_phospholipase_D3-like_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
FPKM:9.00 TPM:9.86
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