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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_BomoFB_comp10081_c0_seq1
401bp
 putative_zinc_finger_protein_[Operophtera_brumata]
FPKM:0.71 TPM:0.78
362 A_BomoFB_comp10081_c0_seq2
1116bp
 PREDICTED:_prostaglandin_reductase_1-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:8.63 TPM:9.46
363 A_BomoFB_comp10081_c0_seq3
1338bp
 PREDICTED:_prostaglandin_reductase_1-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:6.01 TPM:6.58
364 A_BomoFB_comp10081_c0_seq4
2195bp
 PREDICTED:_probable_serine/threonine-protein_kinase_DDB_G0282963_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:6.25 TPM:6.84
365 A_BomoFB_comp100821_c0_seq1
1446bp
 histone_deacetylase_[Anopheles_sinensis]
FPKM:3.05 TPM:3.34
366 A_BomoFB_comp10082_c0_seq1
1296bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.39 TPM:2.62
367 A_BomoFB_comp10082_c0_seq2
969bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
FPKM:1.93 TPM:2.12
368 A_BomoFB_comp100837_c0_seq1
921bp
 PREDICTED:_exocyst_complex_component_7_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008013 F beta-catenin binding
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0098793 C presynapse
FPKM:3.53 TPM:3.87
369 A_BomoFB_comp10083_c0_seq1
3474bp
 PREDICTED:_GTP-binding_protein_SAR1b_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
FPKM:2.20 TPM:2.41
370 A_BomoFB_comp10083_c0_seq2
3490bp
 PREDICTED:_GTP-binding_protein_SAR1b_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
FPKM:16.50 TPM:18.08
371 A_BomoFB_comp100845_c0_seq1
443bp
FPKM:2.71 TPM:2.97
372 A_BomoFB_comp100847_c0_seq1
1087bp
 PREDICTED:_E3_ubiquitin-protein_ligase_Hakai_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0007162 P negative regulation of cell adhesion
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030155 P regulation of cell adhesion
GO:0030335 P positive regulation of cell migration
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:3.66 TPM:4.01
373 A_BomoFB_comp100848_c0_seq1
588bp
FPKM:1.47 TPM:1.62
374 A_BomoFB_comp10084_c0_seq1
223bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.56 TPM:5.00
375 A_BomoFB_comp100852_c0_seq1
478bp
 PREDICTED:_TAF5-like_RNA_polymerase_II_p300/CBP-associated_factor-associated_factor_65_kDa_subunit_5L_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0043966 P histone H3 acetylation
FPKM:3.31 TPM:3.63
376 A_BomoFB_comp10085_c0_seq1
3765bp
 PREDICTED:_alpha-mannosidase_2_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 F alpha-mannosidase activity
GO:0004572 F mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015923 F mannosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016063 P rhodopsin biosynthetic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0035010 P encapsulation of foreign target
GO:0046872 F metal ion binding
FPKM:6.21 TPM:6.81
377 A_BomoFB_comp10085_c1_seq1
1036bp
 PREDICTED:_clathrin_interactor_1_isoform_X3_[Plutella_xylostella]
FPKM:5.41 TPM:5.93
378 A_BomoFB_comp10085_c2_seq1
204bp
FPKM:0.00 TPM:0.00
379 A_BomoFB_comp10085_c2_seq2
812bp
FPKM:60.51 TPM:66.30
380 A_BomoFB_comp10085_c2_seq3
552bp
FPKM:0.00 TPM:0.00
381 A_BomoFB_comp10085_c2_seq4
247bp
FPKM:0.79 TPM:0.87
382 A_BomoFB_comp10085_c2_seq5
819bp
FPKM:4.35 TPM:4.77
383 A_BomoFB_comp10085_c2_seq6
341bp
 fungal_protease_inhibitor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:11.98 TPM:13.13
384 A_BomoFB_comp10085_c2_seq7
716bp
FPKM:0.00 TPM:0.00
385 A_BomoFB_comp100860_c0_seq1
679bp
FPKM:3.83 TPM:4.20
386 A_BomoFB_comp10086_c0_seq1
373bp
FPKM:7.42 TPM:8.13
387 A_BomoFB_comp10087_c0_seq1
430bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.42 TPM:2.65
388 A_BomoFB_comp10088_c0_seq1
1305bp
 PREDICTED:_glyoxylate_reductase/hydroxypyruvate_reductase-like_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0046487 P glyoxylate metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
FPKM:9.82 TPM:10.76
389 A_BomoFB_comp100893_c0_seq1
370bp
 PREDICTED:_aquaporin-like_isoform_X1_[Bombyx_mori]
GO:0002088 P lens development in camera-type eye
GO:0005212 F structural constituent of eye lens
GO:0005215 F transporter activity
GO:0005243 F gap junction channel activity
GO:0005516 F calmodulin binding
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005921 C gap junction
GO:0006810 P transport
GO:0006833 P water transport
GO:0007601 P visual perception
GO:0015250 F water channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0045785 P positive regulation of cell adhesion
GO:0050896 P response to stimulus
GO:0051289 P protein homotetramerization
GO:0055085 P transmembrane transport
GO:1990349 P gap junction-mediated intercellular transport
FPKM:6.67 TPM:7.30
390 A_BomoFB_comp10089_c0_seq1
292bp
 PREDICTED:_cleft_lip_and_palate_transmembrane_protein_1_homolog_[Bombyx_mori]
FPKM:1.70 TPM:1.87
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