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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp100847_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Hakai_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0007162 P negative regulation of cell adhesion
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030155 P regulation of cell adhesion
GO:0030335 P positive regulation of cell migration
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:3.66 TPM:4.01
ORF EntryO_BomoFB19480_3prime_partial:A_BomoFB_comp100847_c0_seq1
Sequence
(Nucleotide)
GCGTGAGGCGCGGGCGGCGGCGCGTAGTATGGCGGCGGCGGGACGCTGAGCGACTGCAGA
ACCGGCACCGACGTCACGGACGGCGGGGGCTGCGTGTAATAGTTGTAATAGTTGTGCTGG
TCAGTGTGGTCATGTATGGGCACGGTGATGAGGTTGGTGCGGGGTCGGCCGTGCCCCCGT
GGGTCGCTCGTACCCACCGACATCGGTGTAATAGGTTTGACCACAGGTACGGAAGGAGAT
GGAGTTTCCGGTTCTACTTTCGGTTCAGTGTTACCGGATGACACGTGTCTATGGTTGATG
TGTGCTTGTAGGTCTCGCTGCGATAAATAAGTTCTCCTGCATCCTGTATTGCCATAACGT
GTTCCGGAATGTGTGCACATATAAACTGTGCCCAAACCGGTTTGTTCTACTCGGAGAACC
TTCTCTCTACACCGAGGGCAGTGCGTGTGATCAGCACGAGCACAAGATAAACAGAAGACA
TGTTTGCATGGTATCATTCTTCCATAAATAAGAATAGGTTTGGAGCATGTATCACAGCAG
TATATCATTGGATTCAAGACCTTCTCTCCAATAAGTGTAGCTCGGTGGCTCCAATCGAGT
CGCAGCATCGGTTCAGGTGGTCCTCTTTGCAAAGTTGTGAATACCGGTGCTTCTAATTGT
GATATGTCTGAGGGAACTTCCAGTTTGGGTGGGTCAACCGGTTCGGGTTCTTCCTTAGGC
TCCTCAACTACTGGTTCTTCAGCATCTTGTGAGGTTTCTTCTACAGAACATTCCTCTTCG
TCACTGGACATTACTTTAGGAACTTTTTTACCTCTACCTCTGCCTCTACCCCTACCTCTT
CCGCGACCACGACCTCTGCCTCGTCCACGGCCGTTCCTTTTTTCTGTGTTCATTTCCAGT
TTCACTTATGAAAGCCACAAATTCATAAGCTAACCTCTTGATGTAAGCTATTAGGTTTTG
TTGAGCGCTCTTATATACTATTTAAATGTAATTAATATATGATTTATGATTAGTTTTTTT
CATCAATCAATGATAGTTAAATTATTGTATTATTTGAATTTGCTAAATTCTTAAAATAAT
ATTCCAG
(1087 bp)

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