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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
391 A_BomoFB_comp10089_c0_seq2
612bp
FPKM:1.14 TPM:1.25
392 A_BomoFB_comp10089_c1_seq1
202bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
393 A_BomoFB_comp1008_c0_seq1
554bp
 PREDICTED:_collagen_alpha-1(IX)_chain-like,_partial_[Papilio_machaon]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
FPKM:1.17 TPM:1.28
394 A_BomoFB_comp100905_c0_seq1
558bp
FPKM:3.04 TPM:3.33
395 A_BomoFB_comp10090_c0_seq1
3270bp
 Yokozuna_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.36 TPM:3.68
396 A_BomoFB_comp10090_c0_seq2
399bp
FPKM:0.00 TPM:0.00
397 A_BomoFB_comp10090_c1_seq1
613bp
 Yokozuna_protein_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:2.02 TPM:2.21
398 A_BomoFB_comp10091_c0_seq1
2221bp
 ecto-nucleotidase_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
FPKM:1.98 TPM:2.17
399 A_BomoFB_comp10091_c0_seq2
1991bp
 ecto-nucleotidase_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
FPKM:9.34 TPM:10.23
400 A_BomoFB_comp10091_c0_seq3
2306bp
 PREDICTED:_protein_5NUC-like_isoform_X2_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
FPKM:8.77 TPM:9.60
401 A_BomoFB_comp10092_c0_seq1
2185bp
 PREDICTED:_choline/ethanolamine_kinase_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
FPKM:2.28 TPM:2.49
402 A_BomoFB_comp10092_c0_seq2
2583bp
 PREDICTED:_choline/ethanolamine_kinase_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
FPKM:13.14 TPM:14.40
403 A_BomoFB_comp10092_c0_seq3
1596bp
 PREDICTED:_choline/ethanolamine_kinase_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004104 F cholinesterase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006580 P ethanolamine metabolic process
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008144 F obsolete drug binding
GO:0008654 P phospholipid biosynthetic process
GO:0009636 P response to toxic substance
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019695 P choline metabolic process
GO:0033265 F choline binding
GO:0042803 F protein homodimerization activity
GO:1904681 P response to 3-methylcholanthrene
FPKM:1.23 TPM:1.35
404 A_BomoFB_comp100930_c0_seq1
273bp
FPKM:6.46 TPM:7.08
405 A_BomoFB_comp10093_c0_seq1
1110bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Papilio_polytes]
GO:0000281 P mitotic cytokinesis
GO:0001669 C acrosomal vesicle
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0007265 P Ras protein signal transduction
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019897 C extrinsic component of plasma membrane
GO:0030496 C midbody
GO:0031313 C extrinsic component of endosome membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
FPKM:2.67 TPM:2.93
406 A_BomoFB_comp10093_c0_seq2
1556bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015879 P carnitine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031231 C intrinsic component of peroxisomal membrane
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
FPKM:13.47 TPM:14.76
407 A_BomoFB_comp10093_c0_seq3
1098bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Papilio_polytes]
GO:0000281 P mitotic cytokinesis
GO:0001669 C acrosomal vesicle
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0007265 P Ras protein signal transduction
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019897 C extrinsic component of plasma membrane
GO:0030496 C midbody
GO:0031313 C extrinsic component of endosome membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
FPKM:2.59 TPM:2.84
408 A_BomoFB_comp10093_c0_seq4
1568bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015879 P carnitine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031231 C intrinsic component of peroxisomal membrane
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
FPKM:0.00 TPM:0.00
409 A_BomoFB_comp100940_c0_seq1
2430bp
FPKM:2.42 TPM:2.65
410 A_BomoFB_comp100946_c0_seq1
461bp
FPKM:2.73 TPM:3.00
411 A_BomoFB_comp10094_c0_seq1
1734bp
 SNF4/AMP-activated_protein_kinase_gamma_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
FPKM:2.52 TPM:2.76
412 A_BomoFB_comp10094_c0_seq2
3283bp
 PREDICTED:_uncharacterized_protein_LOC106130566_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
FPKM:3.32 TPM:3.64
413 A_BomoFB_comp10094_c0_seq3
1744bp
 SNF4/AMP-activated_protein_kinase_gamma_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016208 F AMP binding
GO:0019901 F protein kinase binding
GO:0031588 C nucleotide-activated protein kinase complex
GO:0042304 P regulation of fatty acid biosynthetic process
GO:0043234 C protein-containing complex
GO:0043531 F ADP binding
GO:0050790 P regulation of catalytic activity
GO:0051291 P protein heterooligomerization
FPKM:2.64 TPM:2.89
414 A_BomoFB_comp10094_c0_seq4
2690bp
 PREDICTED:_SNF4/AMP-activated_protein_kinase_gamma_subunit_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
FPKM:6.08 TPM:6.67
415 A_BomoFB_comp10094_c0_seq5
1206bp
 PREDICTED:_SNF4/AMP-activated_protein_kinase_gamma_subunit_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004679 F AMP-activated protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016208 F AMP binding
GO:0019901 F protein kinase binding
GO:0031588 C nucleotide-activated protein kinase complex
GO:0043531 F ADP binding
GO:0061024 P membrane organization
GO:0070062 C extracellular exosome
FPKM:3.16 TPM:3.46
416 A_BomoFB_comp100954_c0_seq1
305bp
 XRE_family_transcriptional_regulator_[Lactobacillus_reuteri]
FPKM:5.29 TPM:5.79
417 A_BomoFB_comp100955_c0_seq1
2084bp
 antennal_esterase_CXE17_[Spodoptera_littoralis]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:3.00 TPM:3.29
418 A_BomoFB_comp10095_c0_seq1
278bp
 hypothetical_protein_RR48_08049_[Papilio_machaon]
FPKM:3.91 TPM:4.28
419 A_BomoFB_comp10095_c0_seq2
1404bp
 PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
FPKM:0.49 TPM:0.54
420 A_BomoFB_comp10095_c0_seq3
1627bp
 PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
FPKM:3.49 TPM:3.82
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