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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_BomoFB_comp100769_c0_seq1
1039bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.68 TPM:4.03
332 A_BomoFB_comp10076_c0_seq1
2052bp
 Uncharacterized_protein_OBRU01_25930_[Operophtera_brumata]
FPKM:12.06 TPM:13.21
333 A_BomoFB_comp100771_c0_seq1
600bp
 predicted_amidohydrolase_[Vibrio_sp._C7]
FPKM:4.30 TPM:4.71
334 A_BomoFB_comp10077_c0_seq1
1253bp
FPKM:1.21 TPM:1.33
335 A_BomoFB_comp10077_c0_seq2
1380bp
 isopentenyl-diphosphate_delta_isomerase_[Bombyx_mori]
GO:0004452 F isopentenyl-diphosphate delta-isomerase activity
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016787 F hydrolase activity
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
GO:0050992 P dimethylallyl diphosphate biosynthetic process
FPKM:5.88 TPM:6.44
336 A_BomoFB_comp10077_c0_seq3
453bp
FPKM:0.00 TPM:0.00
337 A_BomoFB_comp10077_c0_seq4
389bp
FPKM:0.00 TPM:0.00
338 A_BomoFB_comp10077_c0_seq5
1316bp
 isopentenyl-diphosphate_delta_isomerase_[Bombyx_mori]
GO:0004452 F isopentenyl-diphosphate delta-isomerase activity
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016787 F hydrolase activity
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
GO:0050992 P dimethylallyl diphosphate biosynthetic process
FPKM:12.19 TPM:13.36
339 A_BomoFB_comp10077_c0_seq6
1444bp
 PREDICTED:_uncharacterized_protein_F58A4.6_[Bombyx_mori]
FPKM:3.75 TPM:4.11
340 A_BomoFB_comp10077_c1_seq1
1157bp
FPKM:3.23 TPM:3.54
341 A_BomoFB_comp10077_c2_seq1
290bp
FPKM:4.50 TPM:4.93
342 A_BomoFB_comp100781_c0_seq1
998bp
 PREDICTED:_uncharacterized_protein_LOC101740603_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
FPKM:2.86 TPM:3.14
343 A_BomoFB_comp100782_c0_seq1
539bp
 PREDICTED:_uncharacterized_protein_LOC101744850_isoform_X2_[Bombyx_mori]
FPKM:4.27 TPM:4.68
344 A_BomoFB_comp100786_c0_seq1
1601bp
 PREDICTED:_sphingosine-1-phosphate_phosphatase_1-like_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:3.91 TPM:4.28
345 A_BomoFB_comp10078_c0_seq1
3127bp
 neuropeptide_receptor_B1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0004948 F calcitonin receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.96 TPM:1.05
346 A_BomoFB_comp10078_c0_seq2
3517bp
 neuropeptide_receptor_B1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001756 P somitogenesis
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0004948 F calcitonin receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048844 P artery morphogenesis
FPKM:0.35 TPM:0.38
347 A_BomoFB_comp10078_c0_seq3
3560bp
 neuropeptide_receptor_B1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001756 P somitogenesis
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0004948 F calcitonin receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048844 P artery morphogenesis
FPKM:3.91 TPM:4.28
348 A_BomoFB_comp10078_c0_seq4
3170bp
 neuropeptide_receptor_B1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0004948 F calcitonin receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:12.38 TPM:13.57
349 A_BomoFB_comp100792_c0_seq1
806bp
 PREDICTED:_retinoblastoma-like_protein_1_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0001012 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007113 P endomitotic cell cycle
GO:0007307 P eggshell chorion gene amplification
GO:0008134 F transcription factor binding
GO:0008156 P negative regulation of DNA replication
GO:0008285 P negative regulation of cell population proliferation
GO:0008361 P regulation of cell size
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0010629 P negative regulation of gene expression
GO:0010941 P regulation of cell death
GO:0031523 C Myb complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035189 C Rb-E2F complex
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0042594 P response to starvation
GO:0043066 P negative regulation of apoptotic process
GO:0044212 F transcription cis-regulatory region binding
GO:0051101 P regulation of DNA binding
GO:0051726 P regulation of cell cycle
GO:0051983 P regulation of chromosome segregation
GO:0071922 P regulation of cohesin loading
GO:1900117 P regulation of execution phase of apoptosis
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:3.49 TPM:3.82
350 A_BomoFB_comp10079_c0_seq1
1154bp
 putative_YLP_motif_containing_1_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
FPKM:1.70 TPM:1.86
351 A_BomoFB_comp10079_c0_seq2
513bp
 PREDICTED:_YLP_motif-containing_protein_1-like_isoform_X1_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0032204 P regulation of telomere maintenance
GO:0044822 F RNA binding
FPKM:2.38 TPM:2.61
352 A_BomoFB_comp10079_c0_seq3
1479bp
 putative_YLP_motif_containing_1_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
FPKM:6.60 TPM:7.23
353 A_BomoFB_comp10079_c0_seq4
1424bp
 PREDICTED:_zinc_finger_CCCH_domain-containing_protein_13_isoform_X1_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
FPKM:3.09 TPM:3.39
354 A_BomoFB_comp10079_c0_seq5
1145bp
 putative_YLP_motif_containing_1_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
FPKM:0.00 TPM:0.00
355 A_BomoFB_comp10080_c0_seq1
449bp
 hypothetical_protein_BN1211_3749_[Cyberlindnera_jadinii]
FPKM:2.64 TPM:2.89
356 A_BomoFB_comp10080_c0_seq2
658bp
 PREDICTED:_predicted_GPI-anchored_protein_58_[Bombyx_mori]
FPKM:1.53 TPM:1.68
357 A_BomoFB_comp10080_c0_seq3
709bp
 gag-like_protein_[Bombyx_mori]
FPKM:1.45 TPM:1.59
358 A_BomoFB_comp10080_c0_seq4
481bp
 PREDICTED:_predicted_GPI-anchored_protein_58_[Bombyx_mori]
FPKM:0.77 TPM:0.85
359 A_BomoFB_comp10080_c0_seq5
586bp
 PREDICTED:_predicted_GPI-anchored_protein_58_[Bombyx_mori]
FPKM:1.53 TPM:1.68
360 A_BomoFB_comp100813_c0_seq1
689bp
 PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_isoform_X2_[Papilio_xuthus]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.76 TPM:4.11
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