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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3271 A_BomoFB_comp10508_c1_seq2
217bp
FPKM:1.27 TPM:1.39
3272 A_BomoFB_comp10508_c1_seq20
279bp
FPKM:7.19 TPM:7.88
3273 A_BomoFB_comp10508_c1_seq21
5867bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3274 A_BomoFB_comp10508_c1_seq22
4819bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3275 A_BomoFB_comp10508_c1_seq23
5626bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3276 A_BomoFB_comp10508_c1_seq24
3716bp
 PREDICTED:_N-acylneuraminate-9-phosphatase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006045 P N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046380 P N-acetylneuraminate biosynthetic process
GO:0050124 F N-acylneuraminate-9-phosphatase activity
FPKM:0.23 TPM:0.25
3277 A_BomoFB_comp10508_c1_seq25
5154bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.09 TPM:0.09
3278 A_BomoFB_comp10508_c1_seq26
6186bp
 PREDICTED:_N-acylneuraminate-9-phosphatase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006045 P N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046380 P N-acetylneuraminate biosynthetic process
GO:0050124 F N-acylneuraminate-9-phosphatase activity
FPKM:0.42 TPM:0.45
3279 A_BomoFB_comp10508_c1_seq27
5335bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.62 TPM:3.96
3280 A_BomoFB_comp10508_c1_seq28
3472bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.02 TPM:0.02
3281 A_BomoFB_comp10508_c1_seq29
6204bp
 PREDICTED:_N-acylneuraminate-9-phosphatase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006045 P N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046380 P N-acetylneuraminate biosynthetic process
GO:0050124 F N-acylneuraminate-9-phosphatase activity
FPKM:1.61 TPM:1.76
3282 A_BomoFB_comp10508_c1_seq3
5990bp
 PREDICTED:_N-acylneuraminate-9-phosphatase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006045 P N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046380 P N-acetylneuraminate biosynthetic process
GO:0050124 F N-acylneuraminate-9-phosphatase activity
FPKM:0.00 TPM:0.00
3283 A_BomoFB_comp10508_c1_seq30
1809bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_12_[Papilio_machaon]
FPKM:2.30 TPM:2.52
3284 A_BomoFB_comp10508_c1_seq31
5681bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3285 A_BomoFB_comp10508_c1_seq32
2696bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3286 A_BomoFB_comp10508_c1_seq33
6216bp
 PREDICTED:_N-acylneuraminate-9-phosphatase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006045 P N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046380 P N-acetylneuraminate biosynthetic process
GO:0050124 F N-acylneuraminate-9-phosphatase activity
FPKM:0.49 TPM:0.54
3287 A_BomoFB_comp10508_c1_seq34
2577bp
 PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.38 TPM:0.42
3288 A_BomoFB_comp10508_c1_seq35
5276bp
 PREDICTED:_N-acylneuraminate-9-phosphatase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006045 P N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046380 P N-acetylneuraminate biosynthetic process
GO:0050124 F N-acylneuraminate-9-phosphatase activity
FPKM:18.47 TPM:20.24
3289 A_BomoFB_comp10508_c1_seq36
5836bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3290 A_BomoFB_comp10508_c1_seq37
2331bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:15.59 TPM:17.08
3291 A_BomoFB_comp10508_c1_seq38
2300bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:3.99 TPM:4.37
3292 A_BomoFB_comp10508_c1_seq39
2668bp
 PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:7.17 TPM:7.86
3293 A_BomoFB_comp10508_c1_seq4
5131bp
 PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3294 A_BomoFB_comp10508_c1_seq40
6111bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.08 TPM:0.09
3295 A_BomoFB_comp10508_c1_seq41
4755bp
 PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3296 A_BomoFB_comp10508_c1_seq42
4874bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3297 A_BomoFB_comp10508_c1_seq43
3563bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.09 TPM:0.10
3298 A_BomoFB_comp10508_c1_seq44
3339bp
 PREDICTED:_N-acylneuraminate-9-phosphatase,_partial_[Amyelois_transitella]
FPKM:14.93 TPM:16.36
3299 A_BomoFB_comp10508_c1_seq45
6142bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.16 TPM:0.18
3300 A_BomoFB_comp10508_c1_seq46
6057bp
 PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
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