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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10508_c1_seq34
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.38 TPM:0.42
ORF EntryO_BomoFB14591_5prime_partial:A_BomoFB_comp10508_c1_seq34
Sequence
(Nucleotide)
AGTACATAGAAAAACATTTCACTCCGACGGCATTCGTCTCGATCAAAAGCACCCGTCCGA
CTTTATACGCGCTGTTAGCGGCACAGGGGGAGATAGCGGGACTCACGTGTACAGAGAGAA
ACGCGCGTGGCAGGAACAGTACCGCACCAACCCGCGTCAACCCGAGTCCGCATCTCTCGA
GCATATGCTCGGATCTCTTCGGGCAGACATGAGCCGCCAAGGAGTACAAACCCCCCAGAA
GGGATGCTGTAACGCCTGCGAGAAACCAATCGTTGGACAGGTGATCACGGCGCTGGGTCG
CACCTGGCACCCTGAGCACTTCACCTGCGCTCACTGCAACCAGGAACTGGGCACGAGGAA
CTTCTTCGAGCGCGACGGCAGGCCCTACTGCGAACCCGACTACCACAATCTGTTCTCACC
GAGATGCGCTTACTGCAACGGACCAATCTTGGATAAATGCGTCACAGCTCTAGAGAAAAC
GTGGCACACGGAGCACTTCTTTTGCGCTCAATGCGGTCAGCAATTTGGGGAAGAGGGTTT
CCATGAAAGGGACGGGAAGCCCTACTGCAGGGCTGATTACTTTGACATGTTCGCCCCCAA
ATGCGGTGGTTGCAATAAGCCCATAATGGAAAACTATATCTCAGCGCTCAACACCCAGTG
GCATCCAGACTGTTTCGTTTGCAAGGAATGCCGTGAGCCTTTCCACGGAGGTTCGTTCTT
CGAGCACGAGGGCCAACCGTACTGCGAGACGCATTACCACGGAAAGCGAGGGTCATTATG
CGCGGGCTGCCACAAACCGATCGCGGGCCGATGCATCACGGCGATGTTCAGGAAATTCCA
CCCGGAGCACTTCGTCTGCGCGTTTTGCCTTCGACAACTCAACAAAGGCACTTTCAAAGA
ACAAAACGACAAGCCGTACTGCCACGCGTGCTTTGACAAGCTGTTCGGGTAAAATGGCGG
CGAGCGAACGCAAAATGGCGCCTGTTGTTGTCACATCAAAATGTCGGATATCGACAAATA
AATTTTATGTAATACGACTTTTATTAATTATTGATCGGATACAATATATTCGTATTGTTA
TAAAAATCGATTTATTATATTATTAAACTAAATGGAATAACATTAGATTTTATGTGAGAA
CATTGTTTGTTTTTTGTGAGATTTAAAGTCTCGAACAATGAAGTCTAAATATAAACTCAT
CTGCTCACGATCTTAATAGCTCATTGAAAAAGATAATCGATAATCGAAAATTCGAAAAAA
AAAAAAACATTTTTTATTGGTCTAAGTTGTAAAGTTATCAATAAAAGTAAGGAATAATAC
GCAGTAGTAATTTACTACCATTAATTCCTTAAAATCTCTATAAAATTCACTACAGTTATG
TTTAAGGTAAAGAAAACAATGAAAAAAATATTCATTTTCTTACTAAAATGTTAAATTTCT
TAAAATATAACGGATATTCTTTGAAATAGTAGTAGCTAGATAAGTGCATGTGATGACTAA
TTATAAAATATTTATATAAACCCTTATACAGTTTAGATAGGTTTAAATGTTTTTGTCGTC
GGTCTAAAATGTCACAGACATTAATTGAATAAGGTTATAAATAAATATACGCGGTTAGGT
CATAAACAATATTTTTTTAAATAGTGTAGACCAGGAGCCTCCTATGTTATTTGTTTTAGA
TTTTGGTACGCTGATAAATTAGGAAACGGTCAGCACACCCTTGTAAGTAACAATCGCTGA
ATTTTTACTAAATCTCCCATTCTACTTAGGGAGAGAGAACTCAAATAGGGAATATTTGAA
GAGTTGAATATGGAGTTCATGTGTCAAAGCATTTCTTGCCTAAATATCGCTAAGTAATAC
CACTTATACAACAGGTAAACATACTGTAGCTTGTTCGGAGATTTTAACGACCGGCTGTCT
AAAATCAGTCATTCGCGGAAATTTCATTTCCATGTGGTTATCGATTTTTGTTTATAAATG
TCTCATAAAATTCAAACGATAAATAAAATAAATAAATGGACATCATAAATAAATAAACCA
ATATGTATTAAAAACAATTTAGAAAAGGACCGTTTCAACAATCAAGATAGAACCCACATA
TTTCCATTATGACGTCATTGCTTCAGTTATAGAAATTTAATACCAAGTATAATATACCTG
TGAAGTGACAGAGCATCATTAGCCTCTTTAAATTATTTCTTCAACACGGTACATATTGTA
TTGAATTATATTCTTTACTCAGTATTTGTTTTTAATAAACACGACATCAGTCAATTATAT
TATTAACCCTGGTAACGTGTTATGTTAGAAAACAAATAGTGGGTACTACAGTCGTAATAC
CCACATTTTATTTTGTTCAGTGAAACGGATTATATGAGGTATCATCATCATCAGCCTTTA
TCTGCCCACTGCTGGACATAGGCCTTCCCCAATGCCTTCCACATAATGCGGTCCTCCGCC
TTCCGCATCCAACGACTTCCCGCCGTGCGCACTAAGTCGTCAGTCCACCTGGTTGGAGGA
CGCCCCACGCTATTCTATTCTATGCCTTCTATTCGACCCGTAATTATGAGCTTCTCT
(2577 bp)

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