SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10508_c1_seq28
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.02 TPM:0.02
ORF EntryO_BomoFB14581_complete:A_BomoFB_comp10508_c1_seq28
Sequence
(Nucleotide)
GGATGGCTACGGTGCGCACGCGCTCTGCATCCCCCAAATCGGTCTCTTTCTCTCCTGTAC
TCGAACGGAAGTACAGCGTGGAGAGAGGACCTTCGACTCCCCCCGAGCTGAGATCGTCGG
ATTGGAGGAGATACTTCGCGGATTTCAGTGCATATCTAGATGCTTTGCTTGCCGACCTCC
AGAACTCTATCAACCCTGGCGGCGCCCGAGTCAGCAGCCCCAGCGGCAGGACCACGTCGC
CCGGCGGTCGCACCAGTTCCCCGGGCAGAACTGGGTCTCCTCTAGGCAGAGGCACTTCAC
CGGGCCGTCTCAGCTCGTCAGGCAGCCTGAGTTCCCCCACCTCCACCGGCTACGGATCCA
TCAATGGATCTAGGAATATTAGCTCGGATTATGCAAAACCTGCTTCGCCAACTTACCAAA
ACACAAGCTCATTCCACTCAGAGAAGATGACTCCGCACAAATATACGAGTACCGTCCAAA
GCAACTACAGTACCCACACGCCCGGTTACAACGTGGGACAATCGCCAGGCTACGGCAGGA
CCGGTGGTCGAGGGAACCTGAGCGAGCTGGACACCCTACTCGACGACTTGAGCAGTGCCC
GCTACGGGAATTACGCAGAAAAAACTTCGTTCACCGAAAGATCTGTAAATGACAGCTACG
GGCGCAGTAACGGAGCCATCAGTCCGGCGTCAGCGAGGCCCACGGTCGACTCCTTGCTGG
ATCAATTAAGCGCGGAAATACCTAATGGCCGCCAATCCACATCTCCAATACCACCGCCAT
CGACGGGAGGAACTCTCCCCAGACCGGGCACCAAACAGGTGACCGTCACCGTGCAGGAGA
CGGTCGTAGAACCCGCTCAGGCTCAGCAACAGATTCCAGTGGCGGCCCCTGTAGTCCGGC
ACCAGCACCACGCGTCCAGCGCCACCAAGGAACTTGATGACTTGATGGCGTCGCTCTCCG
ACTTCAAGGTTAGCGGCACAGGGGGAGATAGCGGGACTCACGTGTACAGAGAGAAACGCG
CGTGGCAGGAACAGTACCGCACCAACCCGCGTCAACCCGAGTCCGCATCTCTCGAGCATA
TGCTCGGATCTCTTCGGGCAGACATGAGCCGCCAAGGAGTACAAACCCCCCAGAAGGGAT
GCTGTAACGCCTGCGAGAAACCAATCGTTGGACAGGTGATCACGGCGCTGGGTCGCACCT
GGCACCCTGAGCACTTCACCTGCGCTCACTGCAACCAGGAACTGGGCACGAGGAACTTCT
TCGAGCGCGACGGCAGGCCCTACTGCGAACCCGACTACCACAATCTGTTCTCACCGAGAT
GCGCTTACTGCAACGGACCAATCTTGGATAAATGCGTCACAGCTCTAGAGAAAACGTGGC
ACACGGAGCACTTCTTTTGCGCTCAATGCGGTCAGCAATTTGGGGAAGAGGGTTTCCATG
AAAGGGACGGGAAGCCCTACTGCAGGGCTGATTACTTTGACATGTTCGCCCCCAAATGCG
GTGGTTGCAATAAGCCCATAATGGAAAACTATATCTCAGCGCTCAACACCCAGTGGCATC
CAGACTGTTTCGTTTGCAAGGAATGCCGTGAGCCTTTCCACGGAGGTTCGTTCTTCGAGC
ACGAGGGCCAACCGTACTGCGAGACGCATTACCACGGAAAGCGAGGGTCATTATGCGCGG
GCTGCCACAAACCGATCGCGGGCCGATGCATCACGGCGATGTTCAGGAAATTCCACCCGG
AGCACTTCGTCTGCGCGTTTTGCCTTCGACAACTCAACAAAGGCACTTTCAAAGAACAAA
ACGACAAGCCGTACTGCCACGCGTGCTTTGACAAGCTGTTCGGGTAAAATGGCGGCGAGC
GAACGCAAAATGGCGCCTGTTGTTGTCACATCAAAATGTCGGATATCGACAAATAAATTT
TATGTAATACGACTTTTATTAATTATTGATCGGATACAATATATTCGTATTGTTATAAAA
ATCGATTTATTATATTATTAAACTAAATGGAATAACATTAGATTTTATGTGAGAACATTG
TTTGTTTTTTGTGAGATTTAAAGTCTCGAACAATGAAGTCTAAATATAAACTCATCTGCT
CACGATCTTAATAGCTCATTGAAAAAGATAATCGATAATCGAAAATTCGAAAAAAAAAAA
AACATTTTTTATTGGTCTAAGTTGTAAAGTTATCAATAAAAGTAAGGAATAATACGCAGT
AGTAATTTACTACCATTAATTCCTTAAAATCTCTATAAAATTCACTACAGTTATGTTTAA
GGTAAAGAAAACAATGAAAAAAATATTCATTTTCTTACTAAAATGTTAAATTTCTTAAAA
TATAACGGATATTCTTTGAAATAGTAGTAGCTAGATAAGTGCATGTGATGACTAATTATA
AAATATTTATATAAACCCTTATACAGTTTAGATAGGTTTAAATGTTTTTGTCGTCGGTCT
AAAATGTCACAGACATTAATTGAATAAGGTTATAAATAAATATACGCGGTTAGGTCATAA
ACAATATTTTTTTAAATAGTGTAGACCAGGAGCCTCCTATGTTATTTGTTTTAGATTTTG
GTACGCTGATAAATTAGGAAACGGTCAGCACACCCTTGTAAGTAACAATCGCTGAATTTT
TACTAAATCTCCCATTCTACTTAGGGAGAGAGAACTCAAATAGGGAATATTTGAAGAGTT
GAATATGGAGTTCATGTGTCAAAGCATTTCTTGCCTAAATATCGCTAAGTAATACCACTT
ATACAACAGGTAAACATACTGTAGCTTGTTCGGAGATTTTAACGACCGGCTGTCTAAAAT
CAGTCATTCGCGGAAATTTCATTTCCATGTGGTTATCGATTTTTGTTTATAAATGTCTCA
TAAAATTCAAACGATAAATAAAATAAATAAATGGACATCATAAATAAATAAACCAATATG
TATTAAAAACAATTTAGAAAAGGACCGTTTCAACAATCAAGATAGAACCCACATATTTCC
ATTATGACGTCATTGCTTCAGTTATAGAAATTTAATACCAAGTATAATATACCTGTGAAG
TGACAGAGCATCATTAGCCTCTTTAAATTATTTCTTCAACACGGTACATATTGTATTGAA
TTATATTCTTTACTCAGTATTTGTTTTTAATAAACACGACATCAGTCAATTATATTATTA
ACCCTGGTAACGTGTTATGTTAGAAAACAAATAGTGGGTACTACAGTCGTAATACCCACA
TTTTATTTTGTTCAGTGAAACGGATTATATGAGGTATCATCATCATCAGCCTTTATCTGC
CCACTGCTGGACATAGGCCTTCCCCAATGCCTTCCACATAATGCGGTCCTCCGCCTTCCG
CATCCAACGACTTCCCGCCGTGCGCACTAAGTCGTCAGTCCACCTGGTTGGAGGACGCCC
CACGCTATTCTATTCTATGCCTTCTATTCGACCCGTAATTATGAGCTTCTCT
(3472 bp)

- SilkBase 1999-2023 -