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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
301 A_BomoFB_comp100688_c0_seq1
238bp
FPKM:0.00 TPM:0.00
302 A_BomoFB_comp10068_c0_seq1
1595bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:3.84 TPM:4.21
303 A_BomoFB_comp10068_c1_seq1
249bp
FPKM:3.09 TPM:3.39
304 A_BomoFB_comp10069_c0_seq1
2598bp
 PREDICTED:_protein_TRC8_homolog_[Amyelois_transitella]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007418 P ventral midline development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:10.56 TPM:11.57
305 A_BomoFB_comp100706_c0_seq1
1763bp
 PREDICTED:_histone_deacetylase_3_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0017053 C transcription repressor complex
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070491 F DNA-binding transcription factor binding
GO:0070932 P histone H3 deacetylation
FPKM:3.06 TPM:3.35
306 A_BomoFB_comp10070_c0_seq1
1007bp
FPKM:9.62 TPM:10.54
307 A_BomoFB_comp100713_c0_seq1
911bp
 cyclin_J_[Danaus_plexippus]
GO:0005634 C nucleus
FPKM:4.55 TPM:4.98
308 A_BomoFB_comp10071_c0_seq1
426bp
 PREDICTED:_uncharacterized_protein_LOC105386535_[Plutella_xylostella]
FPKM:2.23 TPM:2.45
309 A_BomoFB_comp10071_c0_seq2
247bp
 PREDICTED:_uncharacterized_protein_LOC105392128_[Plutella_xylostella]
FPKM:0.79 TPM:0.87
310 A_BomoFB_comp10071_c0_seq3
447bp
 PREDICTED:_uncharacterized_protein_LOC105386535_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
311 A_BomoFB_comp10071_c0_seq4
577bp
 PREDICTED:_uncharacterized_protein_LOC101742907_[Bombyx_mori]
FPKM:2.34 TPM:2.57
312 A_BomoFB_comp10071_c0_seq5
523bp
 PREDICTED:_uncharacterized_protein_LOC101742907_[Bombyx_mori]
FPKM:0.00 TPM:0.00
313 A_BomoFB_comp100722_c0_seq1
652bp
 Uncharacterized_protein_OBRU01_10722_[Operophtera_brumata]
FPKM:3.47 TPM:3.81
314 A_BomoFB_comp10072_c0_seq1
213bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
315 A_BomoFB_comp10072_c0_seq2
456bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.79 TPM:1.96
316 A_BomoFB_comp10072_c0_seq3
1865bp
 PREDICTED:_protein_SGT1_homolog_[Papilio_machaon]
GO:0000151 C ubiquitin ligase complex
GO:0000776 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0031647 P regulation of protein stability
GO:0043234 C protein-containing complex
GO:0043947 P obsolete positive regulation by host of symbiont catalytic activity
FPKM:14.65 TPM:16.06
317 A_BomoFB_comp100733_c0_seq1
835bp
FPKM:2.91 TPM:3.19
318 A_BomoFB_comp100739_c0_seq1
229bp
FPKM:6.19 TPM:6.79
319 A_BomoFB_comp10073_c0_seq1
4914bp
 PREDICTED:_sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
FPKM:9.03 TPM:9.90
320 A_BomoFB_comp10073_c0_seq2
4418bp
 PREDICTED:_sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X3_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
FPKM:3.44 TPM:3.77
321 A_BomoFB_comp10073_c0_seq3
4971bp
 PREDICTED:_sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
FPKM:6.14 TPM:6.73
322 A_BomoFB_comp10073_c0_seq4
4475bp
 PREDICTED:_sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X3_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
FPKM:1.18 TPM:1.29
323 A_BomoFB_comp100741_c0_seq1
581bp
 ced-6_protein_[Bombyx_mori]
FPKM:4.23 TPM:4.63
324 A_BomoFB_comp100744_c0_seq1
613bp
 PREDICTED:_speckle_targeted_PIP5K1A-regulated_poly(A)_polymerase_isoform_X3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0016180 P snRNA processing
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0050265 F RNA uridylyltransferase activity
GO:0071044 P histone mRNA catabolic process
GO:0098789 P pre-mRNA cleavage required for polyadenylation
FPKM:2.53 TPM:2.77
325 A_BomoFB_comp10074_c0_seq1
2189bp
 PREDICTED:_glycerophosphocholine_phosphodiesterase_GPCPD1_isoform_X2_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
FPKM:0.87 TPM:0.95
326 A_BomoFB_comp10074_c0_seq2
2299bp
 PREDICTED:_glycerophosphocholine_phosphodiesterase_GPCPD1_isoform_X2_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
FPKM:0.00 TPM:0.00
327 A_BomoFB_comp10074_c0_seq3
2820bp
 hypothetical_protein_KGM_02047_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
FPKM:4.89 TPM:5.36
328 A_BomoFB_comp10074_c0_seq4
2710bp
 PREDICTED:_glycerophosphocholine_phosphodiesterase_GPCPD1_isoform_X2_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
FPKM:1.21 TPM:1.32
329 A_BomoFB_comp100750_c0_seq1
509bp
 PREDICTED:_patronin_isoform_X8_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007049 P cell cycle
GO:0008017 F microtubule binding
GO:0030496 C midbody
GO:0030507 F spectrin binding
GO:0031175 P neuron projection development
GO:0051011 F microtubule minus-end binding
GO:0051013 P microtubule severing
FPKM:3.50 TPM:3.83
330 A_BomoFB_comp10075_c0_seq1
2135bp
 PREDICTED:_uncharacterized_protein_LOC105383670_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:2.06 TPM:2.26
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