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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10069_c0_seq1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		PREDICTED:_protein_TRC8_homolog_[Amyelois_transitella]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007418 P ventral midline development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:10.56 TPM:11.57
ORF EntryO_BomoFB11645_complete:A_BomoFB_comp10069_c0_seq1
Sequence
(Nucleotide)
AATTTTTTTTTTTTTTTTTTAAAACAAGACGAATAAAGCACATCTTTATAAGTTCAATTT
TATGTATTAAAATATATCTCAACTTGGTATAGTAGACGTATGCAGTGTGTAACAGATGCT
TGTGTTGTATTTAAATTGTCAGTGATAACGTGTGTGACTTTCCGCTTAAATGAATAATGT
CGCTGAGGTTGAAGGCCCTGGCACTAGTGGAGGTGCTACTGAGGGTGCCACCGTTGTTTG
TGGTGGATGAGTTCCTTAAGATCAGCCTAGGGCTGCCCGTGTCCAGCGAGGAAGTGCCAG
TATTGAGCAATGTCACAGTGGACCACGTCGATATATTGGAGCCAGATGTGAATTACTACG
ATGCTAACTTCTATAATGCATTTTTCGTCACTTTTTTCAAGTTCCTCGTTTGCTGTTCAG
GATGTTTATCGTCACTCTGCATTTTCGTGCTATACGCGAAGCACCTCATCATCGTATACC
TTTACCTCACGTCGCTGGGCATCGTGTTCGTGTCGTACTGGACCAATGTATCCGCAATCA
AACAGATACAAGCTCTCGCACAGCTAGCCACCTCGCCTCACCACTCGTCCAGCATCCTCG
AAGACATTCTAAACTTAAACCTTAAAAATCTGTTCGATCTCGACGGACCCGGCGTTTTGG
TGGTACAGAATTTCGCGATACAGTTCGCTCTCTCGATCGTGTTCAGGAACGTTCACTTGG
GGCCCCGAGTGCCTCTAATACAAAAGCTACTGCCGGTCAGTTTCATGGCCCCCTCGTTTT
TGGCCATGCTACCGATGCCGCCAAATCTCCTGCACCATTCACCAGTATTTTCGTCGTTAC
TACCACTTCTCCTTGTCAAATTTGTATTGTGGTCGTCGACTTACACCATCATTCACGTTA
TCTACGCCGGCTACCAGCACGGTAGATTGTTTGTTAGCAATTACGGTCTGTCGGCGTTAG
TCGAAACTGAGTGGATGCGACTTAACGTCCCCTGCGTTTTGAGGGTTTTCTGGGTGCTGC
GAGTCGCCGAGCACGCCATTCTCCTGCTCATGGATAACTACGATGAAGACACAGAGGAAG
GTGTCCGAATATCTACGCTGCTTGCTGTGCAATCGCTCGCTTCAATGGCCAAATCCTTAC
TGGTGACGGGCTGTGAAACCATCACCGCAGTATTAGGAATGACATCAGTGATCTCATTTT
TCTGCCATTACATTGGAAACTTCTTCCAGTGGATTCTGTTGACCGACGAGGAAGAAGACA
AAAGTATCGGAACCGTATCGGCGATTCTGTTTTACATTTTAGCACTCCAAACTGGTCTAA
CTTCTCTACATCCAGAGAAGAGATTCATTCGTTTGTGCAAGAACGTCTGCTTGTTGTTCA
CGGCTCTATTGCATTTCCTACACAACATAGTCAATCCGATGTTGATGTCGTTGAGTGCTT
CGCACAATCCGAGCATTCACCGGCACGTCAGGGCTCTGGGCGTATGCGCGTTCCTGATAA
TCTTCCCCATATCGCTACTAGTGTATTTGTGGTCTCAACACAACGTGTCCACTTGGCTAT
TAGCGGTCACCGCCTTCAGCATAGAAGTGATAGTCAAAGTGGTCGTTAGTCTCATGATAT
ACTCCTTATTCCTGATCGACGCCTACAGGAGCACGTTCTGGGAGCAGTTGGACGACTACG
TGTATTACATACGCGCTTTCGGTAACACGATCGAATTCTGTTTCGGCATTTTCTTGTTCT
TCAACGGGGCCTGGATCCTGCTGTTCGAATCGGGCGGGGCGATCCGCGCCGTCATGATGT
GCATACACGCGTACTTCAACATATGGTGCGAAGCGAGAGCCGGCTGGTCCGTGTTCATGA
AGCGTCGCACCGCGGTGAACAAGATCAACTCGCTCAAGGAGGCCTCGTACACTCAACTCA
GCAATCTGGACGACGTGTGCGCGATCTGCTACCAGGAGATGCACTCGGCGAAGATAACGC
GCTGCAACCATTTCTTCCACGGCGTCTGCTTGAGGAAGTGGCTGTACGTGCAGGACCGGT
GTCCGCTGTGCCACGATATCCTGTACAAGATCGACAACGATGCGAACAAAGACTCGAACT
CTGACGCCGAGGCGGAGGAAAACAGAAACAACCAGAACCATGTGTTGGAAGAGGGGGCGG
ACCTACTGCTCGGGGATGGCGTGAGGTGGCTCCGCCAGAACTAATCTCCCATACTCGCTT
AAATGTCTCTAAAGTATAATAATTTATATAACGACTTATTTGTGTGTGTGGTATAATCCT
TTCGATTTGTATAGTAAGTTATTCGTTTTAATATTATAGTTATCAAAACGGCACACCTGT
GATTTACGATTCTTTATATTATTATTATGTTTCGTGATAAATGATATTTCGTTAAGGGCG
TTTGAACGTTCAAATGGACGTGTGGCTTTCGGAGTTCCCTAAAATGTACAAGTGAAAAAT
TACTAGTTTTCAAATTTATCAGGAGCTAAATGCAATAAATATTTATAAAAACAAATATAA
ATGCTTTAAAACTTTAAAAAGAAAAAATACCGATTTTTTACAGAACGTTACGTACATATA
TGGCTAAAATTTGGAAAC
(2598 bp)

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