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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2341 A_BomoFB_comp10442_c2_seq7
1593bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_HIRA_homolog_[Papilio_machaon]
FPKM:10.69 TPM:11.72
2342 A_BomoFB_comp10442_c2_seq8
1859bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
2343 A_BomoFB_comp10442_c2_seq9
727bp
 putative_citrate_synthase_1,_mitochondrial_[Papilio_machaon]
FPKM:19.75 TPM:21.64
2344 A_BomoFB_comp104435_c0_seq1
1021bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5-like_[Papilio_machaon]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
FPKM:3.43 TPM:3.76
2345 A_BomoFB_comp10443_c0_seq1
637bp
 PREDICTED:_presqualene_diphosphate_phosphatase-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:5.96 TPM:6.53
2346 A_BomoFB_comp10443_c0_seq2
569bp
 PREDICTED:_presqualene_diphosphate_phosphatase-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:0.00 TPM:0.00
2347 A_BomoFB_comp10443_c0_seq3
1027bp
 PREDICTED:_presqualene_diphosphate_phosphatase-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:13.87 TPM:15.20
2348 A_BomoFB_comp10443_c0_seq4
488bp
 PREDICTED:_presqualene_diphosphate_phosphatase-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:4.26 TPM:4.67
2349 A_BomoFB_comp10443_c0_seq5
520bp
FPKM:29.48 TPM:32.30
2350 A_BomoFB_comp10443_c0_seq6
1108bp
 PREDICTED:_presqualene_diphosphate_phosphatase-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:2.95 TPM:3.23
2351 A_BomoFB_comp10443_c0_seq7
1176bp
 PREDICTED:_presqualene_diphosphate_phosphatase-like_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:7.34 TPM:8.05
2352 A_BomoFB_comp104440_c0_seq1
799bp
 PREDICTED:_protein_hook_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006897 P endocytosis
GO:0008017 F microtubule binding
GO:0030705 P cytoskeleton-dependent intracellular transport
FPKM:3.70 TPM:4.06
2353 A_BomoFB_comp104445_c0_seq1
324bp
FPKM:3.06 TPM:3.36
2354 A_BomoFB_comp10444_c0_seq1
219bp
 hypothetical_protein_AB894_15365,_partial_[Piscirickettsia_salmonis_LF-89_=_ATCC_VR-1361]
FPKM:1.41 TPM:1.54
2355 A_BomoFB_comp10444_c0_seq2
574bp
 hypothetical_protein_KGM_21550_[Danaus_plexippus]
FPKM:2.55 TPM:2.79
2356 A_BomoFB_comp10444_c0_seq3
1123bp
FPKM:4.33 TPM:4.75
2357 A_BomoFB_comp10444_c0_seq4
462bp
 16S_rRNA_(cytosine(1402)-N(4))-methyltransferase_[Desulfobulbus_japonicus]
FPKM:0.96 TPM:1.05
2358 A_BomoFB_comp10444_c0_seq5
245bp
FPKM:1.80 TPM:1.97
2359 A_BomoFB_comp10444_c0_seq6
411bp
 hypothetical_protein_KGM_21550_[Danaus_plexippus]
FPKM:1.82 TPM:2.00
2360 A_BomoFB_comp10444_c0_seq7
426bp
 hypothetical_protein_KGM_21550_[Danaus_plexippus]
FPKM:2.84 TPM:3.11
2361 A_BomoFB_comp10445_c1_seq1
215bp
FPKM:1.32 TPM:1.45
2362 A_BomoFB_comp10445_c2_seq1
932bp
 PREDICTED:_uncharacterized_protein_LOC106143399_[Amyelois_transitella]
FPKM:8.99 TPM:9.85
2363 A_BomoFB_comp10445_c3_seq1
1044bp
 PREDICTED:_selenoprotein_S_A-like_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
2364 A_BomoFB_comp10445_c3_seq10
719bp
 PREDICTED:_uncharacterized_protein_LOC101736261_[Bombyx_mori]
FPKM:25.12 TPM:27.53
2365 A_BomoFB_comp10445_c3_seq11
1875bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.69 TPM:0.76
2366 A_BomoFB_comp10445_c3_seq12
1739bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.37 TPM:0.41
2367 A_BomoFB_comp10445_c3_seq13
1875bp
 PREDICTED:_arylsulfatase_I_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003943 F N-acetylgalactosamine-4-sulfatase activity
GO:0004065 F arylsulfatase activity
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007417 P central nervous system development
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0009268 P response to pH
GO:0009986 C cell surface
GO:0010632 P regulation of epithelial cell migration
GO:0010976 P positive regulation of neuron projection development
GO:0016787 F hydrolase activity
GO:0043627 P response to estrogen
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
GO:0061580 P colon epithelial cell migration
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
2368 A_BomoFB_comp10445_c3_seq14
4639bp
 PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_1-interacting_protein_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
FPKM:0.00 TPM:0.00
2369 A_BomoFB_comp10445_c3_seq15
947bp
 PREDICTED:_selenoprotein_S_A-like_[Plutella_xylostella]
FPKM:41.50 TPM:45.47
2370 A_BomoFB_comp10445_c3_seq16
370bp
FPKM:9.95 TPM:10.91
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