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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp104435_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5-like_[Papilio_machaon]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.43 TPM:3.76
ORF EntryO_BomoFB19608_5prime_partial:A_BomoFB_comp104435_c0_seq1
Sequence
(Nucleotide)
GGAGCCCGCGCCGCCCAGCCGCACGCGCCACCGGCTGCGCCCGGAGTTGTCCACCACCGA
CAGCGACGCGCCCTTCTCGATCGCCACATTAGCGTGTTTGTACGCGCATACGGTCTCAGC
CCTGATGGGTCTGGTGACGGGCGCCCTCCGCAGCTTGACGGGCCTGACTTCCTGCGCCTC
CTCGACGAGACGCGACACGGCGGCTCCGTGCGTGTTCAGCTCTTCCCGAAGGTCCTGCAT
GCCCTTGAGGAGCCTCTCCCCCTGGTCCAAGGTGAACTCCGATTGGGAGAATGTCGTGTT
TAATGCTTCCTCGCGTTTTGCGATCCATTTCTCCGCCTCTTTGATCTCCTCGAAGAAGGT
GTGGTACTGCGTGGTGTGTTTCAAGTGGGTCTCCAAGCAGAGGGTCAGCTGGAGCACCCA
TGCCCATTGAGACTGCATCACCTGCAGGTGGCTCTCGATGGTCTTGGTGGCGGGGTGGTG
CTGCGCGATGAGCGCCTCGCCGCGGTCGATCACGTTGCTGAACTGGAGCTCCCGCTTCTC
AAGGGACGACATGAGTTGCTCGTAATAGTGCTGCACGGCGGGCAGGTTGATGTGCGGGTC
GGCCCAGTCGCGAGACAACTCCACTTGTTCCTTCTCGTTGAGCCAGTTCAACTCCGCCGT
CGCTGATTGAAGGAAGTCGTGTAACGCGTCCAGATCCGACATCCGCTTAGTACTAGTAGA
CAGTAGCTCGGCGTATAACTTTTGCAACTGACTCAGATGCTGGTTGTACAAATTCAACTC
TTCGCCGTTGAAGTTGGAGCGGTTGTGGACGCACTGTTCAACCTTGGAATGGAACTGGTC
GATCAGTTTGTGTTCCCGCTGGTGTTTGTCCAGCTCGTGCAGCACCGACGGCAGGTCGGA
GCCGTATTCTGATTCGTGAAGTTTTTTCAGTTTGTCCCGGCACCAGGCGGCGGCGTCGGC
GAGCTGGTGGAAGCGCGGGTCGGCATCGTGCACGCGCGTCTCCAGCACGGTGCGGGTCTC
G
(1021 bp)

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