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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2371 A_BomoFB_comp10445_c3_seq17
1395bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
GO:0032008 P positive regulation of TOR signaling
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
FPKM:0.00 TPM:0.00
2372 A_BomoFB_comp10445_c3_seq18
1740bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:5.59 TPM:6.12
2373 A_BomoFB_comp10445_c3_seq19
1876bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:4.34 TPM:4.75
2374 A_BomoFB_comp10445_c3_seq2
1419bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
GO:0032008 P positive regulation of TOR signaling
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
FPKM:0.00 TPM:0.00
2375 A_BomoFB_comp10445_c3_seq20
345bp
FPKM:0.75 TPM:0.83
2376 A_BomoFB_comp10445_c3_seq21
10397bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
FPKM:10.21 TPM:11.19
2377 A_BomoFB_comp10445_c3_seq22
369bp
FPKM:5.83 TPM:6.39
2378 A_BomoFB_comp10445_c3_seq23
4663bp
 PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_1-interacting_protein_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
FPKM:2.15 TPM:2.35
2379 A_BomoFB_comp10445_c3_seq24
4554bp
 PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_1-interacting_protein_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
FPKM:0.00 TPM:0.00
2380 A_BomoFB_comp10445_c3_seq25
1851bp
 PREDICTED:_arylsulfatase_I_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003943 F N-acetylgalactosamine-4-sulfatase activity
GO:0004065 F arylsulfatase activity
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007417 P central nervous system development
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0009268 P response to pH
GO:0009986 C cell surface
GO:0010632 P regulation of epithelial cell migration
GO:0010976 P positive regulation of neuron projection development
GO:0016787 F hydrolase activity
GO:0043627 P response to estrogen
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
GO:0061580 P colon epithelial cell migration
GO:0070062 C extracellular exosome
FPKM:26.70 TPM:29.25
2381 A_BomoFB_comp10445_c3_seq26
828bp
FPKM:4.55 TPM:4.98
2382 A_BomoFB_comp10445_c3_seq27
285bp
FPKM:0.00 TPM:0.00
2383 A_BomoFB_comp10445_c3_seq28
1139bp
 PREDICTED:_N-acetylneuraminate_lyase-like_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008747 F N-acetylneuraminate lyase activity
GO:0016829 F lyase activity
GO:0019262 P N-acetylneuraminate catabolic process
FPKM:331.55 TPM:363.28
2384 A_BomoFB_comp10445_c3_seq29
261bp
FPKM:0.00 TPM:0.00
2385 A_BomoFB_comp10445_c3_seq3
4554bp
 PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_1-interacting_protein_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
FPKM:4.19 TPM:4.59
2386 A_BomoFB_comp10445_c3_seq4
1020bp
 PREDICTED:_selenoprotein_S_A-like_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
2387 A_BomoFB_comp10445_c3_seq5
4469bp
 PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_1-interacting_protein_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
FPKM:1.06 TPM:1.16
2388 A_BomoFB_comp10445_c3_seq6
10439bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
FPKM:2.06 TPM:2.25
2389 A_BomoFB_comp10445_c3_seq7
346bp
FPKM:0.00 TPM:0.00
2390 A_BomoFB_comp10445_c3_seq8
4578bp
 PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_1-interacting_protein_isoform_X2_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
FPKM:7.54 TPM:8.26
2391 A_BomoFB_comp10445_c3_seq9
1394bp
 PREDICTED:_sodium-coupled_neutral_amino_acid_transporter_9-like_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
GO:0032008 P positive regulation of TOR signaling
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
FPKM:0.00 TPM:0.00
2392 A_BomoFB_comp10446_c0_seq1
263bp
FPKM:5.88 TPM:6.45
2393 A_BomoFB_comp10446_c1_seq1
828bp
FPKM:17.69 TPM:19.38
2394 A_BomoFB_comp10446_c2_seq1
4548bp
 PREDICTED:_ATP-citrate_synthase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003878 F ATP citrate synthase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0006085 P acetyl-CoA biosynthetic process
GO:0006101 P citrate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
GO:0048037 F obsolete cofactor binding
GO:0070062 C extracellular exosome
FPKM:11.79 TPM:12.92
2395 A_BomoFB_comp10446_c2_seq2
4538bp
 PREDICTED:_ATP-citrate_synthase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003878 F ATP citrate synthase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0006085 P acetyl-CoA biosynthetic process
GO:0006101 P citrate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
GO:0048037 F obsolete cofactor binding
GO:0070062 C extracellular exosome
FPKM:49.11 TPM:53.82
2396 A_BomoFB_comp10446_c3_seq1
557bp
FPKM:0.44 TPM:0.48
2397 A_BomoFB_comp10446_c3_seq10
994bp
FPKM:5.76 TPM:6.31
2398 A_BomoFB_comp10446_c3_seq11
1241bp
 PREDICTED:_heparin_sulfate_O-sulfotransferase_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:0.00 TPM:0.00
2399 A_BomoFB_comp10446_c3_seq12
315bp
 peptidase_M23_[Tenacibaculum_dicentrarchi]
FPKM:0.00 TPM:0.00
2400 A_BomoFB_comp10446_c3_seq13
360bp
FPKM:0.00 TPM:0.00
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