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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2311 A_BomoFB_comp10442_c2_seq10
1240bp
 presenilin_enhancer_[Bombyx_mori]
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
FPKM:5.09 TPM:5.57
2312 A_BomoFB_comp10442_c2_seq11
245bp
FPKM:0.05 TPM:0.06
2313 A_BomoFB_comp10442_c2_seq12
1791bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2314 A_BomoFB_comp10442_c2_seq13
3516bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:1.87 TPM:2.05
2315 A_BomoFB_comp10442_c2_seq14
3714bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:0.01 TPM:0.01
2316 A_BomoFB_comp10442_c2_seq15
211bp
FPKM:1.43 TPM:1.57
2317 A_BomoFB_comp10442_c2_seq16
2012bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
2318 A_BomoFB_comp10442_c2_seq17
3162bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:8.18 TPM:8.96
2319 A_BomoFB_comp10442_c2_seq18
3094bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:1.47 TPM:1.61
2320 A_BomoFB_comp10442_c2_seq19
1392bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:12.13 TPM:13.29
2321 A_BomoFB_comp10442_c2_seq2
3319bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:0.00 TPM:0.00
2322 A_BomoFB_comp10442_c2_seq20
3499bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:0.02 TPM:0.02
2323 A_BomoFB_comp10442_c2_seq21
2039bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
2324 A_BomoFB_comp10442_c2_seq22
1543bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:5.58 TPM:6.11
2325 A_BomoFB_comp10442_c2_seq23
709bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_HIRA_homolog_[Papilio_machaon]
FPKM:0.00 TPM:0.00
2326 A_BomoFB_comp10442_c2_seq24
1841bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:5.15 TPM:5.64
2327 A_BomoFB_comp10442_c2_seq25
3377bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:2.52 TPM:2.76
2328 A_BomoFB_comp10442_c2_seq26
2879bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:2.17 TPM:2.38
2329 A_BomoFB_comp10442_c2_seq27
1611bp
FPKM:0.00 TPM:0.00
2330 A_BomoFB_comp10442_c2_seq28
625bp
FPKM:0.49 TPM:0.53
2331 A_BomoFB_comp10442_c2_seq29
1814bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.20 TPM:3.50
2332 A_BomoFB_comp10442_c2_seq3
1419bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:8.79 TPM:9.63
2333 A_BomoFB_comp10442_c2_seq30
287bp
FPKM:0.00 TPM:0.00
2334 A_BomoFB_comp10442_c2_seq31
1832bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
2335 A_BomoFB_comp10442_c2_seq32
3534bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:0.00 TPM:0.00
2336 A_BomoFB_comp10442_c2_seq33
570bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2337 A_BomoFB_comp10442_c2_seq34
409bp
FPKM:0.00 TPM:0.00
2338 A_BomoFB_comp10442_c2_seq4
1427bp
 PREDICTED:_gelsolin-like_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006909 P phagocytosis
GO:0030041 P actin filament polymerization
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
FPKM:50.32 TPM:55.14
2339 A_BomoFB_comp10442_c2_seq5
1570bp
 PREDICTED:_isocitrate_dehydrogenase_[NAD]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004449 F isocitrate dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.58 TPM:5.02
2340 A_BomoFB_comp10442_c2_seq6
3301bp
 PREDICTED:_growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
FPKM:5.78 TPM:6.33
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